PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01648.1.g00010.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

GeBP

Protein Properties

Length: 413aa MW: 45138.1 Da PI: 9.2944

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01648.1.g00010.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	53.3	7.8e-17	204	292	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfsk 82 +q+lws+ De++lL G fk + g+ p d+ ++yef+k+sis + k + K++rLK Kf++ + s+ Zmw_sc01648.1.g00010.1.am.mk 204 AQKLWSDADEVALLTGAAAFKGRSGVAPRLpDMGELYEFLKDSISPHLDKAKVYYKLKRLKSKFQHSAPG-------ASST 277 79**********************98877********************************99888.......7899 PP DUF573 83 ehdqkifelskkiWg 97 +hd+ + +ls +Wg Zmw_sc01648.1.g00010.1.am.mk 278 PHDRLVRDLSADLWG 292 999999999999998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	4.4E-16	205	292	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence Send to blast
MDLVRCRFSV APGHGRDRWP DVLSGPAFSG WMSRREEKGR VVCCRLPCGP TRRGRRTGST 60 YDPFFYYYNT YDPLGKAVAT ALSRDVGQLT GGSASKDGLC WAGGLMGVDR RKGRSCQFRP 120 FHAQSTALPS AYSPLLLPPR RSPPNSPNPT KFEIARFALP RAADAVQAPS DRKRKPRAFP 180 DSTTLAAVAA VAAAPSASSS RGAAQKLWSD ADEVALLTGA AAFKGRSGVA PRLPDMGELY 240 EFLKDSISPH LDKAKVYYKL KRLKSKFQHS APGASSTPHD RLVRDLSADL WGAELAHQVE 300 EGERPEEDGA DDEEAEGVNA IQVHTGGDSE GPQPERLPIV REVLGEHWRL NRQALSGVSL 360 EKGLLQVAPE KADAAEAKWR QQLEADMRMQ MRWHDLGKEV YGLLMDAIKG LGP

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence Send to blast

MDLVRCRFSV APGHGRDRWP DVLSGPAFSG WMSRREEKGR VVCCRLPCGP TRRGRRTGST  60
YDPFFYYYNT YDPLGKAVAT ALSRDVGQLT GGSASKDGLC WAGGLMGVDR RKGRSCQFRP  120
FHAQSTALPS AYSPLLLPPR RSPPNSPNPT KFEIARFALP RAADAVQAPS DRKRKPRAFP  180
DSTTLAAVAA VAAAPSASSS RGAAQKLWSD ADEVALLTGA AAFKGRSGVA PRLPDMGELY  240
EFLKDSISPH LDKAKVYYKL KRLKSKFQHS APGASSTPHD RLVRDLSADL WGAELAHQVE  300
EGERPEEDGA DDEEAEGVNA IQVHTGGDSE GPQPERLPIV REVLGEHWRL NRQALSGVSL  360
EKGLLQVAPE KADAAEAKWR QQLEADMRMQ MRWHDLGKEV YGLLMDAIKG LGP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002436676.2	1e-87	STOREKEEPER protein
TrEMBL	A0A0A9JI19	5e-93	A0A0A9JI19_ARUDO; Uncharacterized protein
STRING	GRMZM2G008558_P02	2e-86	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2682	27	63