PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01609.1.g00080.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family bHLH
Protein Properties Length: 103aa    MW: 11089.4 Da    PI: 9.4407
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01609.1.g00080.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.11.2e-0628701454
                                  HHHHHHHHHHHCTSCCC.....TTS-STCHHHHHHHHHHHHHH CS
                           HLH 14 driNsafeeLrellPkas..kapskKlsKaeiLekAveYIksL 54
                                  d+i + +++L+ llP+++  ++++ + s a +L+ ++ YI+sL
  Zmw_sc01609.1.g00080.1.am.mk 28 DQISELLSKLQALLPESTqaRNGAHRGSAARVLQDTCSYIRSL 70
                                  6899************7756777778***************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508889.471470IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.4E-82874IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.72E-82889IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    Send to blast
MSSGRRTRPR RAGSTLSSSS SRSTISEDQI SELLSKLQAL LPESTQARNG AHRGSAARVL  60
QDTCSYIRSL HQEVDSLSET LAELLSSADV TSNQAAVIRS LLM
Functional Description ? help Back to Top
Source Description
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of cell elongation and plant development. Binds the transcription repressor IBH1 and forms a heterodimer of antagonistic bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation and lamina inclination (By similarity). {ECO:0000250}.
UniProtAtypical and probable non DNA-binding bHLH transcription factor that acts as a positive regulator of cell elongation and plant development. Binds the transcription repressor IBH1 and forms a heterodimer of antagonistic bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation and lamina inclination. {ECO:0000269|PubMed:20009022}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By epibrassinolide. {ECO:0000269|PubMed:20009022}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002448623.11e-42transcription factor ILI1
RefseqXP_006652899.11e-42PREDICTED: transcription factor ILI1
RefseqXP_025825700.11e-42transcription factor ILI1
SwissprotA2XY471e-41ILI1_ORYSI; Transcription factor ILI1
SwissprotQ7X7421e-41ILI1_ORYSJ; Transcription factor ILI1
TrEMBLA0A2S3IAW33e-41A0A2S3IAW3_9POAL; Uncharacterized protein
TrEMBLA0A2T7D0T13e-41A0A2T7D0T1_9POAL; Uncharacterized protein
TrEMBLA0A3L6Q1253e-41A0A3L6Q125_PANMI; Uncharacterized protein
TrEMBLC5Y8Z33e-41C5Y8Z3_SORBI; Uncharacterized protein
TrEMBLJ3M1V83e-41J3M1V8_ORYBR; Uncharacterized protein
STRINGPavir.Ga00332.1.p6e-42(Panicum virgatum)
STRINGPavir.J06936.1.p6e-42(Panicum virgatum)
STRINGOB04G33830.15e-42(Oryza brachyantha)
STRINGSb06g030340.16e-42(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP122932837