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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc01551.1.g00110.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 264aa MW: 29755.2 Da PI: 8.6001 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc01551.1.g00110.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 94.5 | 7.4e-30 | 36 | 125 | 1 | 87 |
EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT- CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegD 78
f+k ltpsdv+k++rlv+pk++ae++ +g+ e++ l++ede g+ W+++++y+ +s++yvltkGW+++vk+++L++gD
Zmw_sc01551.1.g00110.1.sm.mk 36 FEKPLTPSDVGKLNRLVIPKQHAERYfplSGSGEKGLILSFEDEAGKPWRFRYSYWTSSQSYVLTKGWSRYVKEKHLDAGD 116
99***************************555567889******************************************* PP
EEEEEE-SS CS
B3 79 fvvFkldgr 87
+v F++++
Zmw_sc01551.1.g00110.1.sm.mk 117 VVHFERMRG 125
*****7754 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0080113 | Biological Process | regulation of seed growth |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 264 aa
Download sequence Send
to blast |
MAMNHISQEH PQVWPWGVAM YTNLHYHHHY EKEHLFEKPL TPSDVGKLNR LVIPKQHAER 60 YFPLSGSGEK GLILSFEDEA GKPWRFRYSY WTSSQSYVLT KGWSRYVKEK HLDAGDVVHF 120 ERMRGLGIGD RLFIGFRRRG ESATTRAVAP PLPAVRVAAA AQSAGEQQPW SPMCYSTSGS 180 YPNSPANSYA YRHSVDHDRS NTPHAGESSA ASVPSRRLRL FGVNLDCGPE PEAETPTAMY 240 GSYMQQSPTF PEPSTWSALQ NQSN
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 2e-50 | 31 | 139 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
5os9_B | 2e-50 | 31 | 139 | 3 | 113 | B3 domain-containing transcription factor NGA1 |
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