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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc01523.1.g00080.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
Trihelix |
Protein Properties |
Length: 265aa MW: 28097.2 Da PI: 9.0292 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc01523.1.g00080.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 45.2 | 2.5e-14 | 71 | 152 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessst 78
W++ + aLi+a e+ +l+rg+l+ p+W+ev++++ ++ g+++ s +qCk++++ l+k+yk +++ + + +
Zmw_sc01523.1.g00080.1.sm.mk 71 WSEGATSALIDAWGERFVALGRGSLRHPQWQEVADAVsSRDGYSKapkSNVQCKNRIDTLKKKYKVERAKQAS-------S 144
*************************************87778876333778**************99998886.......5 PP
trihelix 79 cpyfdqle 86
+++fd+l+
Zmw_sc01523.1.g00080.1.sm.mk 145 WQFFDRLD 152
99**9997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 265 aa
Download sequence Send
to blast |
MDDDDDVSGS ASPSPDSSPA ASALPVADPV TVAAAPPGGA FALALPIQRT AASLYPTSGG 60 GGGGGGREDA WSEGATSALI DAWGERFVAL GRGSLRHPQW QEVADAVSSR DGYSKAPKSN 120 VQCKNRIDTL KKKYKVERAK QASSWQFFDR LDVLLAPTYG QKPAAAGQKH VPNGRNPVHT 180 ALHVGFPHPQ RSRTPLMPSA VKRREPSPEP SASLESSDGF PPPALPAANG KRRRTDEDHG 240 DGDSDHERAQ GLRELSLVIR XXXXR
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Functional Description ? help
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Source |
Description |
UniProt | Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}. |