PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01523.1.g00080.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Trihelix

Protein Properties

Length: 265aa MW: 28097.2 Da PI: 9.0292

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01523.1.g00080.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.2	2.5e-14	71	152	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessst 78 W++ + aLi+a e+ +l+rg+l+ p+W+ev++++ ++ g+++ s +qCk++++ l+k+yk +++ + + + Zmw_sc01523.1.g00080.1.sm.mk 71 WSEGATSALIDAWGERFVALGRGSLRHPQWQEVADAVsSRDGYSKapkSNVQCKNRIDTLKKKYKVERAKQAS-------S 144 ***********************************87778876333778**********99998886.......5 PP trihelix 79 cpyfdqle 86 +++fd+l+ Zmw_sc01523.1.g00080.1.sm.mk 145 WQFFDRLD 152 999997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	3.6E-23	69	153	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence Send to blast
MDDDDDVSGS ASPSPDSSPA ASALPVADPV TVAAAPPGGA FALALPIQRT AASLYPTSGG 60 GGGGGGREDA WSEGATSALI DAWGERFVAL GRGSLRHPQW QEVADAVSSR DGYSKAPKSN 120 VQCKNRIDTL KKKYKVERAK QASSWQFFDR LDVLLAPTYG QKPAAAGQKH VPNGRNPVHT 180 ALHVGFPHPQ RSRTPLMPSA VKRREPSPEP SASLESSDGF PPPALPAANG KRRRTDEDHG 240 DGDSDHERAQ GLRELSLVIR XXXXR

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269\|PubMed:21330492}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020197552.1	1e-113	trihelix transcription factor ASIL2-like
Swissprot	Q9LJG8	4e-39	ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBL	F2CYX6	1e-113	F2CYX6_HORVV; Predicted protein
STRING	Traes_2BL_0C45635DD1.4	1e-111	(Triticum aestivum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2404	30	69