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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc01488.1.g00070.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
ERF |
Protein Properties |
Length: 383aa MW: 41839.4 Da PI: 4.5528 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc01488.1.g00070.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.3 | 5.3e-20 | 131 | 182 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+g++GVr++ +g+WvAeIr+p + r r +lg+f tae+Aa+a+++a+++++ge
Zmw_sc01488.1.g00070.1.sm.mkhc 131 CGFRGVRQRT-WGKWVAEIREP---N-RaNRLWLGTFPTAEDAARAYDEAARAMYGE 182
79*****999.**********8...3.469************************996 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 383 aa
Download sequence Send
to blast |
MTVDQKAATP SRMQQVQPLQ PGRTYGAEDT VVHDPLRKIG GRALPSNEYV LSVHQRQQED 60 APRVASDMWK KRPRRSRDGP NSVTAVIQRW AQINQELEHD PEAAKKQRKA PAKGSKKGCM 120 KGKGGPENTV CGFRGVRQRT WGKWVAEIRE PNRANRLWLG TFPTAEDAAR AYDEAARAMY 180 GELARTNFPS HVSTSTQLAP APLEVVQPVS VSSESTMTSN HSDIVSSDKP DASDISSTMN 240 SGAESLGTMP CEPKIESASL DQSADGHLVP EAGSSSAADE VFEPLEPIAN LPLGNEVFDI 300 DEMLSMMEAD PQNEGSWNTT NGGDARAGLE QPPFVDGLDA TLLENMLQSE PEPWLMSQDT 360 EMYLAGFENP DFFEGSGFPE KLN
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gcc_A | 1e-15 | 133 | 192 | 3 | 63 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
2gcc_A | 2e-15 | 133 | 194 | 6 | 68 | ATERF1 |
3gcc_A | 2e-15 | 133 | 194 | 6 | 68 | ATERF1 |
5wx9_A | 3e-15 | 133 | 196 | 15 | 79 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Involved in drought and heat-shock stress tolerance. {ECO:0000269|PubMed:20049613}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By heat shock, high-salt and drought stresses. {ECO:0000269|PubMed:20049613}. |