PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01458.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

NAC

Protein Properties

Length: 384aa MW: 41882.7 Da PI: 4.7254

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01458.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	44.8	4e-14	12	147	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyat.gkrk 74 f F P+d lv + L++k+ g +++ + + + d+++v P++L + + +++ ++ yfFs+++ +++ +k++ Zmw_sc01458.1.g00050.1.am.mk 12 FMFTPSDRRLV-DILRAKIGGGDFPNAAYFVDDDVCSVRPEELVRkhskparvrsREAGDGRQFYFFSPESFVSTRtKKQR 91 89*******.88*****999888**********73367777554322225568899999876655313333 PP NAM 75 nra....tksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 +r+ + W+ g+ k v ++ g + + f+ k ++ k W+m ey+l Zmw_sc01458.1.g00050.1.am.mk 92 KRTidrtSGNECWHGEGSGKLVDG---TNDGYMTKFSFHiKIAGETVAKPGWLMTEYSL 147 343232133567*9877754...567888889999444667777*******98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	20.155	8	163	IPR003441	NAC domain
Pfam	PF02365	2.7E-10	12	147	IPR003441	NAC domain
SuperFamily	SSF101941	9.55E-20	12	163	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence Send to blast
MDAFPAAEDD SFMFTPSDRR LVDILRAKIG GGDFPNAAYF VDDDVCSVRP EELVRKHSKP 60 ARVRSREAGD GRQFYFFSPE SFVSTRTKKQ RKRTIDRTSG NECWHGEGSG KLVDGTNDGY 120 MTKFSFHIKI AGETVAKPGW LMTEYSLKGT GAGGWVLCKI YKSPRGPGRS TAPSSLENKR 180 KAADDLEDAR PSTKERRQDQ IDANGALEGD LPLPSDDLPS VNPAVQTVYG ALTDGEVIDA 240 LASGVTVDEL IPSTTEDRQP EPHVLPASFD ALMHMMHCPL GVWEVPNGMR TEAFEAYRGL 300 FGSTYDVVNA QNNATVQTGP GALTDGGVVA AHASGATIDE LIPSTTDERQ PESQVLFEDD 360 GMPFQVPEFV DTHTHFMGLI FGKN

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence Send to blast

MDAFPAAEDD SFMFTPSDRR LVDILRAKIG GGDFPNAAYF VDDDVCSVRP EELVRKHSKP  60
ARVRSREAGD GRQFYFFSPE SFVSTRTKKQ RKRTIDRTSG NECWHGEGSG KLVDGTNDGY  120
MTKFSFHIKI AGETVAKPGW LMTEYSLKGT GAGGWVLCKI YKSPRGPGRS TAPSSLENKR  180
KAADDLEDAR PSTKERRQDQ IDANGALEGD LPLPSDDLPS VNPAVQTVYG ALTDGEVIDA  240
LASGVTVDEL IPSTTEDRQP EPHVLPASFD ALMHMMHCPL GVWEVPNGMR TEAFEAYRGL  300
FGSTYDVVNA QNNATVQTGP GALTDGGVVA AHASGATIDE LIPSTTDERQ PESQVLFEDD  360
GMPFQVPEFV DTHTHFMGLI FGKN

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6280	15	45