PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01453.1.g00090.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family G2-like
Protein Properties Length: 217aa    MW: 24452.9 Da    PI: 9.8431
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01453.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.11.7e-2784134252
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 
                                   pr+rWt eLH++F++a+e LGG++kAtPk il++m+ +gLt++hvkSHLQk
  Zmw_sc01453.1.g00090.1.am.mk  84 PRIRWTAELHRSFLQAIECLGGQDKATPKLILRFMGAEGLTISHVKSHLQK 134
                                   9*************************************************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.2E-2680134IPR009057Homeodomain-like
SuperFamilySSF466892.15E-1581136IPR009057Homeodomain-like
TIGRFAMsTIGR015574.0E-2284134IPR006447Myb domain, plants
PfamPF002491.6E-687134IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    Send to blast
MRWLESLDQC IPFVPFHLFT SHASQYAKSC QEEEAGENRK ASVWFFPLAP AAFSSPGCLR  60
VQASEMGSGG RNGAVRRYNR SKEPRIRWTA ELHRSFLQAI ECLGGQDKAT PKLILRFMGA  120
EGLTISHVKS HLQKREVWTV WRRKKRAEMG TEASYKGMQG SQGISEMRTA ANQYYCMHDY  180
MQAMAMEGRI KQEGLRWQRD AAAAAAADVV SSLQTVG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-1685134453Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-1685134453Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-1685134352Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-1685134352Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-1685134352Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-1685134352Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-1685134453Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-1685134453Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-1685134453Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-1685134453Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-1685134453Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-1685134453Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006652650.15e-55PREDICTED: uncharacterized protein LOC102700890
TrEMBLJ3M0G91e-53J3M0G9_ORYBR; Uncharacterized protein
STRINGOB04G28940.12e-54(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29663583