PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01358.1.g00130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 399aa MW: 42772.5 Da PI: 4.5396 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60 | 5.5e-19 | 57 | 106 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d ++ r++lg+f+taeeAa+a+++a+ l+g Zmw_sc01358.1.g00130.1.sm.mk 57 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 106 789******.7*********33....35**********************99998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 4.11E-29 | 56 | 113 | No hit | No description |
SuperFamily | SSF54171 | 3.4E-19 | 57 | 114 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 4.6E-35 | 57 | 120 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.8E-27 | 57 | 113 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 19.559 | 57 | 114 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 9.8E-14 | 57 | 106 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.7E-8 | 58 | 69 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.7E-8 | 80 | 96 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 399 aa Download sequence Send to blast |
MARKRKAFDA VADIDGGGDA LSPLPSLVST DACAWSLGGR VAAVVAASAQ QQRGRKRFVG 60 VRQRPSGRWV AEIKDTIQKI RVWLGTFDTA EEAARAYDEA ACLLRGANTR TNFWPRPSPP 120 ILTAAAAHPM TPPAHVTNLT LALSPKVTNL LLLRLRAHNQ QLLNATAAQH QVQAALLQGA 180 SCQEAYDGEE CGFQVDDYLS YDCGSDADAT SSQEMDDDEE AAEEEKLDFR FMDAASPVAD 240 FSDFGLCSPF EALAAELGGS LTNADVDGEP ETAVRDMMRR IDYERKFSAS LYALHGVSEC 300 LKMRLGSTGA GVRDQLSGLR EACRKKRHEA VVAVQQQRRE QEPAAEKAED GKAGQETCSS 360 SAGSSGDDAE TEVARASSEA SGVDEGDVLW SSLDLGPIC |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025809285.1 | 1e-123 | ethylene-responsive transcription factor ERF118-like | ||||
TrEMBL | A0A1E5WFR2 | 1e-136 | A0A1E5WFR2_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Cb00448.1.p | 1e-124 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5482 | 30 | 52 |