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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc01249.1.g00070.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
ERF |
Protein Properties |
Length: 334aa MW: 36291.8 Da PI: 9.6501 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc01249.1.g00070.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.9 | 1.4e-19 | 68 | 117 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+G+r+++ +g+W+AeIrdps+ r++lg++ taeeAa+a++a ++k++g
Zmw_sc01249.1.g00070.1.sm.mkhc 68 QYRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTYNTAEEAARAYDAEARKIRG 117
69*******.**********965...4*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0034059 | Biological Process | response to anoxia |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MCGGAILSSF IRPSGAAAAA KKKKKKQQSR RIVRLRPRHG SYYDVITPKS AQHDAPAAKS 60 AKRSRKNQYR GIRQRPWGKW AAEIRDPSKG VRVWLGTYNT AEEAARAYDA EARKIRGKKA 120 KVNFPDEGLN GHKSILKPSA ANGTTLAPPS KTCADEAFGD PRTGDNDLFA MFAFNDTKVP 180 VKPAETAAFL APLKPLVPTE KFGTNMLSDQ SSNSYGSSSD FGWDDDTMTP DYTSVFAPTN 240 AVPTYAEPAY LQDGPSKKMR NNYGVAVPKG NGAPNLTQNM SGFDPEMKYV QMPYIESSSD 300 VSMDSLLQDD VAQDGASNGD LWSLDELLMA AGAY
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1gcc_A | 4e-20 | 68 | 125 | 2 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
2gcc_A | 4e-20 | 68 | 125 | 5 | 63 | ATERF1 |
3gcc_A | 4e-20 | 68 | 125 | 5 | 63 | ATERF1 |
5wx9_A | 1e-19 | 68 | 127 | 14 | 74 | Ethylene-responsive transcription factor ERF096 |
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