|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc01240.1.g00220.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
Family |
MYB |
Protein Properties |
Length: 299aa MW: 31118.4 Da PI: 5.417 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc01240.1.g00220.1 | genome | ZGD | - |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 30.2 | 1e-09 | 16 | 64 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwq 45
g+WT e ++ + +av+ + +W++Ia+ + g+t+++++ ++
Zmw_sc01240.1.g00220.1.sm.mkhc 16 GAWTREQEKAFENAVATVAEDdqegdaRWEKIAELVE-GKTAEEIRRHYE 64
79*****************99****************.**********95 PP
|
2 | Myb_DNA-binding | 39.8 | 1e-12 | 127 | 171 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT++E+ l++ + +++G+g+W++I+r + Rt+ q+ s+ qky
Zmw_sc01240.1.g00220.1.sm.mkhc 127 AWTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKY 171
6*****************************99************9 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 299 aa
Download sequence Send
to blast |
MAVEEAIASS SEEGAGAWTR EQEKAFENAV ATVAEDDQEG DARWEKIAEL VEGKTAEEIR 60 RHYELLVEDV DGIEAGRVPL PTYAGEAGAD EGGGGGGSGK KGSGGGGGSG EKGSAKSAEQ 120 ERRKGIAWTE DEHRLFLLGL EKYGKGDWRS ISRNFVISRT PTQVASHAQK YFIRLNSMNR 180 ERRRSSIHDI TSVNNGDASA AQGPITGTNG QAANPGKSTK QTPQLANTPP GVDTYGTTIG 240 QPVGGPLVSA VGTPVTLPVP APPHMAYGIH APVAGAVVPG APVNIAPMPY PMPPPPSHG
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}. |