PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01208.1.g00120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 479aa MW: 50439.9 Da PI: 9.5261 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.2 | 1.5e-11 | 43 | 91 | 2 | 54 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54 +y+GV+ ++ +++ A I+dp++ ++r++lg+++t+eeAa a++aa + ++ Zmw_sc01208.1.g00120.1.am.mk 43 RYHGVT-SRYGNKFGAMIQDPKT---KRRVWLGTYDTPEEAACAYDAAVRTMK 91 699**9.67799********954...5*********************98876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 7.9E-19 | 43 | 100 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.18E-13 | 43 | 99 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 14.341 | 43 | 99 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.18E-15 | 43 | 101 | No hit | No description |
SMART | SM00380 | 7.8E-16 | 43 | 105 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 5.2E-5 | 45 | 90 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 479 aa Download sequence Send to blast |
MLRIATMASN EAAGRPQRDE GWWLPLRADR VAQGREPSSS GRRYHGVTSR YGNKFGAMIQ 60 DPKTKRRVWL GTYDTPEEAA CAYDAAVRTM KSNPKFNFPE LIRGEEEKSA AAVLAHFAET 120 KRKRKLAEEA VPPPSAPAPA GDVVGLPEPP TNFPGEEDAL AALKMLQGQG EASSKNKALE 180 AVVSSLSPAP SSSSAPAAPT SHYASTPVST AFKYPFFAPT SAGSTSAFRF ATPVLTPALL 240 NFMFPTSHAM ALPPSFHSEP SPAAPSPPAP APAVHSVPVF DPAPLAFHYP HWSAPPPGFH 300 LAPAPAAPAD KSVVSTAPSS SALAPAPDNA SASHFASFFA PTPAPPAAFH LPDTTAPPPG 360 FHLAPAPAAP ATTPLTWQLM YQRHLALSSL QAQQSLRTLR PLLSMSPLGA AIMNTSSVSQ 420 PYGSSSSGAP EISEAELAGY RSLYRMLERE AAGGGLGDVR IDDPGTQDRS RKKKRRGEA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 471 | 475 | KKKRR |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP35333 | 3 | 4 |