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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01207.1.g00090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 418aa MW: 44693.6 Da PI: 5.5971 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.2 | 1.1e-30 | 200 | 258 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY+++Hnh+ Zmw_sc01207.1.g00090.1.am.mk 200 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPSMLVITYTSDHNHP 258 699************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 32.742 | 194 | 260 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.2E-31 | 194 | 260 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.45E-26 | 197 | 260 | IPR003657 | WRKY domain |
SMART | SM00774 | 6.3E-37 | 199 | 259 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.4E-25 | 201 | 258 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence Send to blast |
MCDFFWPSLA DEGDLADVVR ASLQQLPAAA TPASATELVS ADAHGHLPAE EVEGFLPTHG 60 VSCRGNHDHG DEVHLQPQWQ LVHGNGMGVT VGSSGGGSCD PLLLHSSPSY PLLEPQQTEG 120 LIRHVMSGPT PQLLGVGEGD CDMAALEMDE QGLDMAMDPH APAIKRRKSQ TKKVVCIPAP 180 TAAPPVVGGR PSTSGEVVPS DLWAWRKYGQ KPIKGSPYPR GYYRCSSSKG CSARKQVERS 240 RTDPSMLVIT YTSDHNHPWP TQRNVLAGST STRPAAAAKS QHSTAATVPP PPTRHHHTIG 300 TVGDSASSSS TGDNNVHQQQ VPKQEVLDVM DHPMPAQSAA AVHDLDMFAE TDGALNIMQT 360 FNFNPQKQQQ KQQLATAADG DDDDLLQDDK QQLLDPFSFN FFDWVGASFG IGDANKGG |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 6e-24 | 168 | 261 | 2 | 80 | Disease resistance protein RRS1 |
5w3x_D | 6e-24 | 168 | 261 | 2 | 80 | Disease resistance protein RRS1 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008658838.1 | 1e-111 | probable WRKY transcription factor 35 | ||||
TrEMBL | A0A1E5W3V0 | 1e-114 | A0A1E5W3V0_9POAL; Putative WRKY transcription factor 35 | ||||
STRING | GRMZM2G383594_P01 | 1e-111 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP11847 | 30 | 39 |