PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01199.1.g00130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 528aa MW: 57344.2 Da PI: 11.9887 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.9 | 8.9e-17 | 413 | 463 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr ++ +g+++AeIr p + r +lg+f+taeeAa+a+++a+ +++g Zmw_sc01199.1.g00130.1.am.mk 413 KYRGVRKRP-WGKFAAEIRNPERG--GSRDWLGTFDTAEEAARAYDRAAFAMKG 463 8********.**********8333..4999*********************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 2.88E-21 | 413 | 472 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 5.7E-12 | 413 | 463 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.6E-29 | 413 | 472 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.1E-32 | 413 | 477 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.96 | 413 | 471 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.07E-19 | 413 | 472 | No hit | No description |
PRINTS | PR00367 | 3.9E-10 | 414 | 425 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.9E-10 | 437 | 453 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 528 aa Download sequence Send to blast |
MPFEVVIFDL ATASVCTVAL PAGDRGDHSC PCLAACVAFT NARRRLRKNL LIRLLPPSPS 60 SSRGHAPIWR RATPRLRGGG RDEVVAPRPY RVRPQESRPS AGAAVTGARD QPTGASHGPR 120 QHGTGSMDAA RGMPNRAARC AGDRRVTGRR RARGVDGERR AGAFANHCRN AAILCRAIEI 180 PLSALLGRFE PVLARSRIPG PGRWASLWFR ARTRMRRCPS GGIPSAGRFR LTPLHMGTQV 240 DSGARAMRSR AAPRDRESLS PGPGRQSARP PVHLLIRPAP GENSGRPLFL ALVRCPRAPD 300 SAAQRRPPPS ARGPAYQRRR RHPACVAPSY CTVTHRNRAH QAVGIRHRSL LDRSLYPSAA 360 AFRVVVRRAE TSAAGIGKAR SDPNGPAPLM IRQHEVATRA SSSGRTDDKK EGKYRGVRKR 420 PWGKFAAEIR NPERGGSRDW LGTFDTAEEA ARAYDRAAFA MKGAAAVLNF PAEAGRMSGG 480 SSSSSTSAPA TAARGRAQIP DSEKVELEYL DDRILEELLA EDKYHKNY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 2e-27 | 401 | 514 | 2 | 114 | Ethylene-responsive transcription factor ERF096 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 42 | 47 | RRRLRK |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP103 | 37 | 465 |