PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01199.1.g00130.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 528aa    MW: 57344.2 Da    PI: 11.9887
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01199.1.g00130.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.98.9e-17413463255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr ++ +g+++AeIr p  +    r +lg+f+taeeAa+a+++a+ +++g
  Zmw_sc01199.1.g00130.1.am.mk 413 KYRGVRKRP-WGKFAAEIRNPERG--GSRDWLGTFDTAEEAARAYDRAAFAMKG 463
                                   8********.**********8333..4999*********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541712.88E-21413472IPR016177DNA-binding domain
PfamPF008475.7E-12413463IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-29413472IPR001471AP2/ERF domain
SMARTSM003803.1E-32413477IPR001471AP2/ERF domain
PROSITE profilePS5103223.96413471IPR001471AP2/ERF domain
CDDcd000181.07E-19413472No hitNo description
PRINTSPR003673.9E-10414425IPR001471AP2/ERF domain
PRINTSPR003673.9E-10437453IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 528 aa     Download sequence    Send to blast
MPFEVVIFDL ATASVCTVAL PAGDRGDHSC PCLAACVAFT NARRRLRKNL LIRLLPPSPS  60
SSRGHAPIWR RATPRLRGGG RDEVVAPRPY RVRPQESRPS AGAAVTGARD QPTGASHGPR  120
QHGTGSMDAA RGMPNRAARC AGDRRVTGRR RARGVDGERR AGAFANHCRN AAILCRAIEI  180
PLSALLGRFE PVLARSRIPG PGRWASLWFR ARTRMRRCPS GGIPSAGRFR LTPLHMGTQV  240
DSGARAMRSR AAPRDRESLS PGPGRQSARP PVHLLIRPAP GENSGRPLFL ALVRCPRAPD  300
SAAQRRPPPS ARGPAYQRRR RHPACVAPSY CTVTHRNRAH QAVGIRHRSL LDRSLYPSAA  360
AFRVVVRRAE TSAAGIGKAR SDPNGPAPLM IRQHEVATRA SSSGRTDDKK EGKYRGVRKR  420
PWGKFAAEIR NPERGGSRDW LGTFDTAEEA ARAYDRAAFA MKGAAAVLNF PAEAGRMSGG  480
SSSSSTSAPA TAARGRAQIP DSEKVELEYL DDRILEELLA EDKYHKNY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-274015142114Ethylene-responsive transcription factor ERF096
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14247RRRLRK
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465