PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01193.1.g00050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 908aa MW: 97748.9 Da PI: 11.668 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 712 | 763 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++++GVr ++ +gr++AeIrdp k+ r++lg+++taeeAa+a++aa+++++g+ Zmw_sc01193.1.g00050.1.am.mk 712 PHFRGVRKRP-WGRFAAEIRDPA---KKSRVWLGTYDTAEEAARAYDAAAREFRGA 763 689*******.**********83...36*************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 2.0E-13 | 712 | 762 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 7.80E-16 | 712 | 772 | No hit | No description |
SMART | SM00380 | 3.5E-36 | 713 | 776 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.7E-31 | 713 | 771 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.96E-21 | 713 | 771 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 23.986 | 713 | 770 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-9 | 714 | 725 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.3E-9 | 736 | 752 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 908 aa Download sequence Send to blast |
MNAGRERVHV VVHPPFSRIG QEGREGSCGL QPTGSDFGPG IDRHSMLHHD YEHDQAKPPR 60 WEQVNNPNCC SSRLPLPTVN FRCRQIRRDA DANQTEPRSS TGGRCVVKHD VNIRRQVGRG 120 VGDDDLDLVA RRTSGDVSLA PHPAPRAPRR PSPSPRPTGN KQTRWALASQ GQSHRMIRIA 180 PAPPRSGSVR ISLHSTWRRA DGAVRVPRAR GGIPPATRST KVAHTPAARR GPPAARNCQV 240 RALFVCAVGF RRHPISAGLH LGAMTSPLYY CGSEVRRILA VICPVARTFS NSPGHRETVS 300 ALPRACDGRG RVTRPAATPV PGGGRCGSCV WLSWLLVYGE RFEIKRDQRR TVAVGAPADP 360 RSKQTESLCR SRHFGAPPRA DPHFAGGVTA CPRPGTRLVP SLRTWLIAQP QEYVLRGSGT 420 GLCRCRQQVA HHHTVRAVRP TERKAGNSLP SANGVRVLSA RVESRGTRTA RFPARQVPFA 480 ARMRPARVND PLAATGGERE RRAEDGRVGR GQTDSAAVEA AAAPRVFTPA ACAADADTDP 540 RPLTPARDAR IVMRRLPRRG TRDVRARRAA LSSPRSRAAG DRSEKRPPNF NPASLKTSGG 600 GEDRTVKPLA DCAQFYSLSR RSTTRSPLFP CFLAFFNPAA GYKMAPPPPS PYPRRQHPPT 660 LAQHIAGTET PAPARHLYTP AAPMAPSTAE KSPVPPATGL GLGVGGGVGL GPHFRGVRKR 720 PWGRFAAEIR DPAKKSRVWL GTYDTAEEAA RAYDAAAREF RGAKAKTNFP HASQCPVPTG 780 GGSPSSNSTV ESSGGGAQAL PVQGMPLPPT LDLDIFRRAA VRFPFKGFQV ARPAPNPYFF 840 YEQAAAAAAA AAGYRMFKVV PPVTVAALAQ SDSDSSSVID HTPSPPAVTA KKEAAFDLDL 900 NWPPPAED |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 3e-20 | 711 | 770 | 3 | 63 | ATERF1 |
3gcc_A | 3e-20 | 711 | 770 | 3 | 63 | ATERF1 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3846 | 31 | 74 |