PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01193.1.g00050.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 908aa    MW: 97748.9 Da    PI: 11.668
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01193.1.g00050.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.8e-19712763156
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                   ++++GVr ++ +gr++AeIrdp    k+ r++lg+++taeeAa+a++aa+++++g+
  Zmw_sc01193.1.g00050.1.am.mk 712 PHFRGVRKRP-WGRFAAEIRDPA---KKSRVWLGTYDTAEEAARAYDAAAREFRGA 763
                                   689*******.**********83...36*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.0E-13712762IPR001471AP2/ERF domain
CDDcd000187.80E-16712772No hitNo description
SMARTSM003803.5E-36713776IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-31713771IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-21713771IPR016177DNA-binding domain
PROSITE profilePS5103223.986713770IPR001471AP2/ERF domain
PRINTSPR003671.3E-9714725IPR001471AP2/ERF domain
PRINTSPR003671.3E-9736752IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 908 aa     Download sequence    Send to blast
MNAGRERVHV VVHPPFSRIG QEGREGSCGL QPTGSDFGPG IDRHSMLHHD YEHDQAKPPR  60
WEQVNNPNCC SSRLPLPTVN FRCRQIRRDA DANQTEPRSS TGGRCVVKHD VNIRRQVGRG  120
VGDDDLDLVA RRTSGDVSLA PHPAPRAPRR PSPSPRPTGN KQTRWALASQ GQSHRMIRIA  180
PAPPRSGSVR ISLHSTWRRA DGAVRVPRAR GGIPPATRST KVAHTPAARR GPPAARNCQV  240
RALFVCAVGF RRHPISAGLH LGAMTSPLYY CGSEVRRILA VICPVARTFS NSPGHRETVS  300
ALPRACDGRG RVTRPAATPV PGGGRCGSCV WLSWLLVYGE RFEIKRDQRR TVAVGAPADP  360
RSKQTESLCR SRHFGAPPRA DPHFAGGVTA CPRPGTRLVP SLRTWLIAQP QEYVLRGSGT  420
GLCRCRQQVA HHHTVRAVRP TERKAGNSLP SANGVRVLSA RVESRGTRTA RFPARQVPFA  480
ARMRPARVND PLAATGGERE RRAEDGRVGR GQTDSAAVEA AAAPRVFTPA ACAADADTDP  540
RPLTPARDAR IVMRRLPRRG TRDVRARRAA LSSPRSRAAG DRSEKRPPNF NPASLKTSGG  600
GEDRTVKPLA DCAQFYSLSR RSTTRSPLFP CFLAFFNPAA GYKMAPPPPS PYPRRQHPPT  660
LAQHIAGTET PAPARHLYTP AAPMAPSTAE KSPVPPATGL GLGVGGGVGL GPHFRGVRKR  720
PWGRFAAEIR DPAKKSRVWL GTYDTAEEAA RAYDAAAREF RGAKAKTNFP HASQCPVPTG  780
GGSPSSNSTV ESSGGGAQAL PVQGMPLPPT LDLDIFRRAA VRFPFKGFQV ARPAPNPYFF  840
YEQAAAAAAA AAGYRMFKVV PPVTVAALAQ SDSDSSSVID HTPSPPAVTA KKEAAFDLDL  900
NWPPPAED
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-20711770363ATERF1
3gcc_A3e-20711770363ATERF1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38463174