PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01184.1.g00010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | GRF | ||||||||
Protein Properties | Length: 193aa MW: 20795.8 Da PI: 8.5962 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 65 | 1.1e-20 | 111 | 155 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 ++epgrCrRtDGKkWRC r +++++k+C+ H+hrgr+r + ++e Zmw_sc01184.1.g00010.1.am.mkhc 111 EPEPGRCRRTDGKKWRCCRSTIPNEKYCQGHMHRGRKRPVQLVVE 155 69************************************9998875 PP | |||||||
2 | QLQ | 45.8 | 1.8e-16 | 46 | 80 | 3 | 37 |
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 F a+Qlq+L++Q +y y+aa++PvP +L+++i+k Zmw_sc01184.1.g00010.1.am.mkhc 46 FAAMQLQELEQQSRVYHYMAARVPVPTHLVFPIWK 80 889******************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00951 | 3.5E-4 | 44 | 80 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
PROSITE profile | PS51666 | 17.502 | 45 | 80 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
Pfam | PF08880 | 2.0E-10 | 46 | 79 | IPR014978 | Glutamine-Leucine-Glutamine, QLQ |
PROSITE profile | PS51667 | 20.829 | 111 | 155 | IPR014977 | WRC domain |
Pfam | PF08879 | 2.5E-18 | 112 | 150 | IPR014977 | WRC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005524 | Molecular Function | ATP binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence Send to blast |
MCPVALGTQG ISGVLAWFRS VAAAAALQEE MKALIASIPD GAGAVFAAMQ LQELEQQSRV 60 YHYMAARVPV PTHLVFPIWK SVTGASSEGA QKYPTLMGLA TLCLDFGKDP EPEPGRCRRT 120 DGKKWRCCRS TIPNEKYCQG HMHRGRKRPV QLVVEDDEPD SAPGSETTPG KADDKNASNK 180 KLTVAAPTAV KSS |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Involved in the regulation of cell proliferation in developing shoots and leaves (PubMed:24854713). Does not possess transactivation activity (PubMed:24854713). {ECO:0000269|PubMed:24854713}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025800926.1 | 1e-108 | growth-regulating factor 11-like | ||||
Swissprot | A5HEG9 | 1e-103 | GRF10_MAIZE; GRF-interacting factor 10 | ||||
TrEMBL | A0A2S3H2A3 | 1e-107 | A0A2S3H2A3_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A2T7EVY2 | 1e-107 | A0A2T7EVY2_9POAL; Uncharacterized protein | ||||
TrEMBL | A0A3L6QSN3 | 1e-107 | A0A3L6QSN3_PANMI; Growth-regulating factor 11-like | ||||
TrEMBL | A0A3L6T504 | 1e-107 | A0A3L6T504_PANMI; Growth-regulating factor 11-like | ||||
STRING | Pavir.Bb02610.1.p | 1e-110 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6735 | 31 | 52 |
Publications ? help Back to Top | |||
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