PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01180.1.g00170.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family CAMTA
Protein Properties Length: 595aa    MW: 68110.9 Da    PI: 8.0218
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01180.1.g00170.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-192.15.2e-292496374
                            CG-1  3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLK 74
                                    +e k+rwl+++e+++iL+n+e ++++++++++p+sgs++Lynr+++r+fr+DGy+w+kk +gk+ +E+he+LK
  Zmw_sc01180.1.g00170.1.sm.mkhc 24 QEtKTRWLRPKEVLQILQNHEWFTIAQKPAQKPPSGSWFLYNRRVLRFFRNDGYKWQKKNNGKASNEAHERLK 96
                                    5669********************************************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143739.20519158IPR005559CG-1 DNA-binding domain
SMARTSM010761.6E-3222124IPR005559CG-1 DNA-binding domain
PfamPF038595.8E-232698IPR005559CG-1 DNA-binding domain
SuperFamilySSF484038.39E-14254350IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.201.1E-14254352IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.592255320IPR020683Ankyrin repeat-containing domain
PfamPF136372.0E-8256309No hitNo description
CDDcd002044.40E-9257305No hitNo description
PROSITE profilePS5008810.472288320IPR002110Ankyrin repeat
SMARTSM002480.0049288317IPR002110Ankyrin repeat
SMARTSM00015250409431IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.632410439IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525408.23E-5451504IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.17454476IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.163455484IPR000048IQ motif, EF-hand binding site
PfamPF006120.19456475IPR000048IQ motif, EF-hand binding site
SMARTSM000150.067477499IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.755478506IPR000048IQ motif, EF-hand binding site
PfamPF006120.012479498IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500966.504553582IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 595 aa     Download sequence    Send to blast
MQQQGKPGSR DASLRTFDIH KLEQETKTRW LRPKEVLQIL QNHEWFTIAQ KPAQKPPSGS  60
WFLYNRRVLR FFRNDGYKWQ KKNNGKASNE AHERLKSLRN NDYYTFITPQ VYEHIVFVHY  120
RDVLEEKAAL RKLKMQLSLE DKEEYDVNTE EVPSNNEPIV VHEIQNGERE SCTDPDDIFN  180
VLDFNEEHTK EAEIHPFLSA IDVLQNSDQM KNTYEKHNES TINHVMEVLL NDKFEQWLSS  240
KVEQSSDGDH FLPKQYHTVI HTIAALGYEW ALKPLLSSGV LVNYRDANGW TALHWAARFG  300
REGMVAALLA AGAAAGALSH PTSEDPAAKT PASVASAHGF SGLSAFLSEA QLLTHLDSLE  360
SKENANCNDG ATEGGILSVV ERIWDKCTHV HGGSDDQLAL KDTLRAIRNA VQAAGRIQSA  420
FRVFSFRKKQ EMARQNRNSG SLSVHESIAV SHNILEKAAL SIQKNFRCWK KREEFLRMRK  480
NVIKIQARVR AHQEKKKYEE LLRSVGILEK VMLRWYRRGV GLRGFNSGAM LIDEDVGEDV  540
VKVFRKQRVE TAIDEAVSRV SSIINSPLAR QQYRRMLEMY QQAKDCREEV EAADT
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004971097.10.0calmodulin-binding transcription activator 4
SwissprotQ9FYG24e-86CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A0A9AIS60.0A0A0A9AIS6_ARUDO; Uncharacterized protein
STRINGSi000282m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP94073440
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]