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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc01111.1.g00030.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
HD-ZIP |
Protein Properties |
Length: 228aa MW: 25022.8 Da PI: 7.9319 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc01111.1.g00030.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 55.2 | 1.2e-17 | 91 | 145 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq + Le+ F++++ +s +++ eLA++++Lt rqV vWFqNrRa+ k
Zmw_sc01111.1.g00030.1.sm.mk 91 RKKLQLSKEQATLLEDTFRSHNILSYAQKHELARRVNLTPRQVEVWFQNRRARTK 145
678899***********************************************98 PP
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2 | HD-ZIP_I/II | 111.8 | 4.6e-36 | 91 | 178 | 1 | 88 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLe 81
+kk++lskeq++lLE++F++++ L+ +K+elar+++l+prqv+vWFqnrRARtk+kq+E+d+e Lkr++ +l+ en+rL+
Zmw_sc01111.1.g00030.1.sm.mk 91 RKKLQLSKEQATLLEDTFRSHNILSYAQKHELARRVNLTPRQVEVWFQNRRARTKLKQTEVDCEILKRCCASLTVENQRLK 171
69******************************************************************************* PP
HD-ZIP_I/II 82 keveeLr 88
+e L+
Zmw_sc01111.1.g00030.1.sm.mk 172 HELVGLQ 178
*998886 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 228 aa
Download sequence Send
to blast |
MSYSPSCMEE EDLGAWLGLG IGGGGGGGGG CSPSRSHGER WSSVRFDKQD EMRGCGYEQA 60 ENKKSDDKGR TRKRCPSPSE EEDDGGDGGA RKKLQLSKEQ ATLLEDTFRS HNILSYAQKH 120 ELARRVNLTP RQVEVWFQNR RARTKLKQTE VDCEILKRCC ASLTVENQRL KHELVGLQRS 180 GAVAGLYVVD NQFPRAAPAD TVSVCPSCEK VTLTSVGDTS NKSSSYSS
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 139 | 147 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |