PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01101.1.g00160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 249aa MW: 27343.2 Da PI: 6.1711 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 62.6 | 7.1e-20 | 132 | 194 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST....T---EEEEEE.-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa....gCpvkkkver.saedpkvveitYegeHnhe 59 +Dg++WrKYG K++ + +++r YY+C + +Cp+kk v++ s+++p ++++t+ +eH+++ Zmw_sc01101.1.g00160.1.sm.mk 132 NDGFSWRKYGEKKILNDPYTRMYYKCGNSdshsKCPAKKYVQQqSNSEPPLFTVTFINEHTCS 194 7*************************6544455********872567999***********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 8.0E-22 | 118 | 194 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 15.847 | 126 | 196 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.96E-19 | 127 | 194 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.7E-23 | 131 | 195 | IPR003657 | WRKY domain |
Pfam | PF03106 | 3.8E-21 | 132 | 193 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MPKSEGMSPS SSQPPSNWRK AAIQELSRGT ELAARLRQQV ELIPELDRRE AVVANVSEIS 60 EAMEASLSIL QSESEHSSSE ALQAGCAAYS SDGGSEPRHG AAARGRKVKH RRGRLGEEST 120 VIKEIQTDSP DNDGFSWRKY GEKKILNDPY TRMYYKCGNS DSHSKCPAKK YVQQQSNSEP 180 PLFTVTFINE HTCSTAFPDE PSSSSDSSHV IDFTKPSSLS PPLMEGASGP GVKQEEEAMT 240 SVFAHRWAY |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025808777.1 | 1e-80 | probable WRKY transcription factor 62 | ||||
TrEMBL | A0A2T7ECG8 | 8e-80 | A0A2T7ECG8_9POAL; Uncharacterized protein | ||||
STRING | Si022933m | 2e-75 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9993 | 29 | 44 |