PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01099.1.g00060.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

ERF

Protein Properties

Length: 996aa MW: 108062 Da PI: 11.0819

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01099.1.g00060.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.3	3.3e-17	808	857	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+++++g Zmw_sc01099.1.g00060.1.am.mk 808 TYRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 857 69**998.******843...6*********************9987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.30.200.20	0.001	2	33	No hit	No description
SuperFamily	SSF56112	2.6E-5	2	46	IPR011009	Protein kinase-like domain
Gene3D	G3DSA:3.30.730.10	1.4E-31	808	866	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	8.5E-21	808	866	IPR016177	DNA-binding domain
Pfam	PF00847	1.4E-11	808	857	IPR001471	AP2/ERF domain
SMART	SM00380	6.2E-36	808	871	IPR001471	AP2/ERF domain
PROSITE profile	PS51032	23.393	808	865	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.3E-9	809	820	IPR001471	AP2/ERF domain
CDD	cd00018	4.88E-28	809	867	No hit	No description
PRINTS	PR00367	1.3E-9	831	847	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 996 aa Download sequence Send to blast
LAELGTVGHA RHPNLCALLG CCVDCDLYLV FEFSCRGSVY ANLQVHRTRG VAADGVGRRG 60 VAAPRLPQAS VPPAAGDLDG SGEGDGVGRW RCKGAPRAAE LWARLSARIR RAALRGLRWA 120 AHLDGCTTPR PGSERPAGPW ALARAIGRDT QQAPVRQPCE YGVHQRIQLC HFVERATGVA 180 HTSRAEQRAD TKTCRRRPLQ VEMSQSYLRA PRARRCMNAF LEKPARHRRD FSTSRCLFFF 240 PALSVSWGAA IVVRRRGLYG TVVPVVFIEE RTPGKVKTCR PEKGVLTATL VWSCSKTRNN 300 QPCYDAATLL QRGRRSTASE SLRTKRRRRE KATLAITAPA RDGERGRRRQ WPADAGIAHH 360 DARRRAAGRA RERARNVPGA HGEQARRQGT GGRYSRHMPP STHPDPSVPW RSAAVTRTGA 420 PGTGRQPRCV NQRVALDMSW PWRRRPVSFS LFPPNVPSPR KSRSRVKPKR HGVVGTATRA 480 PPRMPHPTKR VPGRVTHTLL GVSPSTGPGR TAATRAPAGE HRERACRLDR VELTKQERQD 540 LPRMWRYLAS RDRSPAVLIK YAVSGNPMTP PPKVPIMDAL SAAKIQGNGR GGRSQGVQWA 600 KQIHVPQSAG DVLSRPYALL RRTCMLAGPR FATCATVAQH IIDLSGVPLA GCGELHGRCL 660 AGLGMCCVSP ARLQGTEHRG VQQPTVSPGP ISTHTPLVLP HHPLILVLAL RTAREVVMVQ 720 ELQETSSSSS ATTSSCTACS TASCSSTVTD SSSSPASPAE ANATPAPRKR QAAEAEAETG 780 GENEEEEGCA VKAMAKKRKR SSEGKHPTYR GVRMRAWGKW VSEIREPRKK SRIWLGTFPT 840 AEMAARAHDV AALAIKGRAA HLNFPDLTGV LPRAASAAPK DVQAAAALAA AFTTDPETAA 900 TTAPCHPQQE PANNKAAAQV DSAAEETLPA PPPAASTLAT PSSSSVVEDE RQLFDLPDLL 960 LDIRDGFGCF PAMWAPLPDV EEVNAELRLE EPLLWE

Sequence ? help Back to Top

Protein Sequence Length: 996 aa Download sequence Send to blast

LAELGTVGHA RHPNLCALLG CCVDCDLYLV FEFSCRGSVY ANLQVHRTRG VAADGVGRRG  60
VAAPRLPQAS VPPAAGDLDG SGEGDGVGRW RCKGAPRAAE LWARLSARIR RAALRGLRWA  120
AHLDGCTTPR PGSERPAGPW ALARAIGRDT QQAPVRQPCE YGVHQRIQLC HFVERATGVA  180
HTSRAEQRAD TKTCRRRPLQ VEMSQSYLRA PRARRCMNAF LEKPARHRRD FSTSRCLFFF  240
PALSVSWGAA IVVRRRGLYG TVVPVVFIEE RTPGKVKTCR PEKGVLTATL VWSCSKTRNN  300
QPCYDAATLL QRGRRSTASE SLRTKRRRRE KATLAITAPA RDGERGRRRQ WPADAGIAHH  360
DARRRAAGRA RERARNVPGA HGEQARRQGT GGRYSRHMPP STHPDPSVPW RSAAVTRTGA  420
PGTGRQPRCV NQRVALDMSW PWRRRPVSFS LFPPNVPSPR KSRSRVKPKR HGVVGTATRA  480
PPRMPHPTKR VPGRVTHTLL GVSPSTGPGR TAATRAPAGE HRERACRLDR VELTKQERQD  540
LPRMWRYLAS RDRSPAVLIK YAVSGNPMTP PPKVPIMDAL SAAKIQGNGR GGRSQGVQWA  600
KQIHVPQSAG DVLSRPYALL RRTCMLAGPR FATCATVAQH IIDLSGVPLA GCGELHGRCL  660
AGLGMCCVSP ARLQGTEHRG VQQPTVSPGP ISTHTPLVLP HHPLILVLAL RTAREVVMVQ  720
ELQETSSSSS ATTSSCTACS TASCSSTVTD SSSSPASPAE ANATPAPRKR QAAEAEAETG  780
GENEEEEGCA VKAMAKKRKR SSEGKHPTYR GVRMRAWGKW VSEIREPRKK SRIWLGTFPT  840
AEMAARAHDV AALAIKGRAA HLNFPDLTGV LPRAASAAPK DVQAAAALAA AFTTDPETAA  900
TTAPCHPQQE PANNKAAAQV DSAAEETLPA PPPAASTLAT PSSSSVVEDE RQLFDLPDLL  960
LDIRDGFGCF PAMWAPLPDV EEVNAELRLE EPLLWE

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5wx9_A	1e-15	800	865	6	72	Ethylene-responsive transcription factor ERF096

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	325	330	RRRREK
2	795	800	KKRKRS

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP65594	2	2