PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01069.1.g00190.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 348aa MW: 35430.8 Da PI: 8.2907

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01069.1.g00190.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124	4.9e-39	36	96	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ l+cprCds ntkfCyynnyslsqPr+fCk CrryWtkGGalrnvP+Ggg+rknk+s+ Zmw_sc01069.1.g00190.1.am.mk 36 PEQGLRCPRCDSPNTKFCYYNNYSLSQPRHFCKMCRRYWTKGGALRNVPIGGGCRKNKRSR 96 67899*****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.0E-32	38	94	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	7.0E-29	40	93	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.301	40	94	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	42	78	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0010052	Biological Process	guard cell differentiation
GO:0010118	Biological Process	stomatal movement
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:1902066	Biological Process	regulation of cell wall pectin metabolic process
GO:0005634	Cellular Component	nucleus
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence Send to blast
MASSTAVAGG EDVVGPRTGG GNGGGGTTPQ QQPPPPEQGL RCPRCDSPNT KFCYYNNYSL 60 SQPRHFCKMC RRYWTKGGAL RNVPIGGGCR KNKRSRSSVM SASAAVAAAS SHLSLNLPVD 120 GIGVTAASAD QQVAARLGFL GVGAPVVSSP IGGTPAADYQ GAAVGMMALP RINAPAVGHY 180 LPFGERPSGP GVDITGVGGH AMSGGPTGAV PVSSNIASSI ESLSFINQDL HWKLQQQRLA 240 TMILSRPPSS GAAVHVEGAA TEHVSGPFMQ MAGVSAMDAV PVETSWFMDS SYVLPLHNTA 300 AAIGNSTSNG NVNSGRSSAD DGNATSNSNC GSAMIPAWGD MSTFAMLP

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence Send to blast

MASSTAVAGG EDVVGPRTGG GNGGGGTTPQ QQPPPPEQGL RCPRCDSPNT KFCYYNNYSL  60
SQPRHFCKMC RRYWTKGGAL RNVPIGGGCR KNKRSRSSVM SASAAVAAAS SHLSLNLPVD  120
GIGVTAASAD QQVAARLGFL GVGAPVVSSP IGGTPAADYQ GAAVGMMALP RINAPAVGHY  180
LPFGERPSGP GVDITGVGGH AMSGGPTGAV PVSSNIASSI ESLSFINQDL HWKLQQQRLA  240
TMILSRPPSS GAAVHVEGAA TEHVSGPFMQ MAGVSAMDAV PVETSWFMDS SYVLPLHNTA  300
AAIGNSTSNG NVNSGRSSAD DGNATSNSNC GSAMIPAWGD MSTFAMLP

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025796800.1	1e-106	dof zinc finger protein DOF5.7-like
TrEMBL	A0A3L6SBJ5	1e-108	A0A3L6SBJ5_PANMI; Dof zinc finger protein DOF5.7-like
STRING	Si036311m	1e-103	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367