PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01063.1.g00210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | GeBP | ||||||||
Protein Properties | Length: 381aa MW: 40923.1 Da PI: 5.8998 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 112.1 | 3.5e-35 | 86 | 185 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkep 78 lfqrlw+eeDeiv+L+G+ +f+a +g+ +++ d+d fye +++++++++sksqlveK+rrLK+K++++v++ ++sg+ + Zmw_sc01063.1.g00210.1.sm.mk 86 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRRRLQLDFSKSQLVEKLRRLKRKYHNCVSRlRDSGDAF 166 79************************99877778***************************************8999**** PP DUF573 79 sfskehdqkifelskkiWg 97 sf+++h+q ife+++ iW+ Zmw_sc01063.1.g00210.1.sm.mk 167 SFRSPHEQAIFEIARNIWR 185 ******************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 5.6E-31 | 87 | 184 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence Send to blast |
MSPTGDDPSA TAAAAAPGGT TFPDADGGGH SEDGDFPHAH LLDPSEPGLP DPASSSAAVL 60 PHAVPAGGSG SCGPVTSGNG SERRPLFQRL WTEEDEIVIL RGFAEFTAAR GTAFASHQYD 120 TDPFYEDMRR RLQLDFSKSQ LVEKLRRLKR KYHNCVSRLR DSGDAFSFRS PHEQAIFEIA 180 RNIWRPANKH GRDPAADSDD EDAVASAAAT AVPGSTSPNG KVMSPSSGRQ RRRRRATEAA 240 SAPAPAMNMV QPPQPVQLPV SVPVKMDDSP ALTQTPMPVM VIMDGSEPLR LPAMSPQSGG 300 PDAEKNCLIP LLKDMISAVI NVGVNPFGAK LPELPLGLPM EGEKWRKQRI LELEVYLKRI 360 ELLQDQVKAT LDELKSSTPG T |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002461092.1 | 0.0 | probable transcription factor At3g04930 | ||||
TrEMBL | A0A1E5UXC0 | 0.0 | A0A1E5UXC0_9POAL; Uncharacterized protein | ||||
STRING | Sb02g040550.1 | 0.0 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP974 | 37 | 123 |