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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc01057.1.g00140.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 377aa MW: 41459.2 Da PI: 7.1947 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc01057.1.g00140.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56.2 | 7.8e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l + ++++G g+W+t+++ g+ R++k+c++rw +yl
Zmw_sc01057.1.g00140.1.sm.mk 14 KGLWSPEEDEKLMNHITKHGHGCWSTVPKLAGLQRCGKSCRLRWINYL 61
678*******************************************97 PP
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2 | Myb_DNA-binding | 47.3 | 4.8e-15 | 67 | 109 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
rg++++eE++l+v++++ lG++ W+ Ia ++ gRt++++k+ w+
Zmw_sc01057.1.g00140.1.sm.mk 67 RGAFSQEEEDLIVELHAVLGNR-WSQIATQLP-GRTDNEIKNLWN 109
89********************.*********.*********998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 377 aa
Download sequence Send
to blast |
MGRHSCCYKQ KLRKGLWSPE EDEKLMNHIT KHGHGCWSTV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGAF SQEEEDLIVE LHAVLGNRWS QIATQLPGRT DNEIKNLWNS SIKKKLCQKG 120 IDPNTHKPLA EVDRSKVAPT ISTERTSESS DVDPSSGGAI GNLNHLLSET AQSPELLPVL 180 GKQRKEFTSL AHLRVPTKEL FLDQLVPGHD NIASGHLTGP IPNFPFQQLS CYGNGFGSSH 240 GGNTNSLWYN QNEPSGSTIS TVMPPVSPST LSTSTGLNRS PDNQQPGGTA IQSTQFHWDT 300 TDPSSTSSRG SSGSNGLGFE LQGMSSLLEN SVFPWSELAP DKSSQAHLEE EFKWPDLLHG 360 TFTDTPATFF SKQQSTQ
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that coordinates a small network of downstream target genes required for several aspects of plant growth and development, such as xylem formation and xylem cell differentiation, and lateral root formation (PubMed:22708996). Regulates a specific set of target genes by binding DNA to the AC cis-element 5'-ACCTAC-3' (PubMed:23741471). Functions as a transcriptional regulator of stomatal closure. Plays a role the regulation of stomatal pore size independently of abscisic acid (ABA) (PubMed:16005292). Required for seed coat mucilage deposition during the development of the seed coat epidermis (PubMed:19401413). Involved in the induction of trichome initiation and branching by positively regulating GL1 and GL2. Required for gibberellin (GA) biosynthesis and degradation by positively affecting the expression of the enzymes that convert GA9 into the bioactive GA4, as well as the enzymes involved in the degradation of GA4 (PubMed:28207974). {ECO:0000269|PubMed:16005292, ECO:0000269|PubMed:19401413, ECO:0000269|PubMed:22708996, ECO:0000269|PubMed:23741471, ECO:0000269|PubMed:28207974}. |