PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01051.1.g00160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 1051aa MW: 111816 Da PI: 10.1455 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.3 | 2.2e-19 | 835 | 885 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr+++ +g+++AeIrd + r r++lg+f+taeeAa+ ++ a+ +l+g Zmw_sc01051.1.g00160.1.am.mk 835 TKFRGVRRRP-WGKYAAEIRDpW-----RgVRVWLGTFDTAEEAARVYDSAAIQLRG 885 69********.**********88.....55*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 7.89E-28 | 835 | 892 | No hit | No description |
Pfam | PF00847 | 6.8E-12 | 835 | 885 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 9.0E-34 | 836 | 899 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 23.196 | 836 | 893 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 7.9E-29 | 836 | 893 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.75E-21 | 836 | 893 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.9E-9 | 837 | 848 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.9E-9 | 859 | 875 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 1051 aa Download sequence Send to blast |
MVNTTTTECG LLVAEASTDW STVTVVETST TRRVLATMVE ASTNRKVLVM DVTENSTNRK 60 DEHYHAVNYS ACVQAWMESS LLLLHAAFRE WASKRQHEQG KDRGGGTEAG GSTRFVKAGC 120 CTDEQCHPYG LSSKLYTPTV HARGRRAKPL AAGCSACESE GACRTASCPN RQNFLSSDVS 180 PDPAHVYGVD GHRARDLPRR AHTGCSRAGK IHRCAVPSPS RGWQEEPAGR RYGDLTVPAG 240 RYRARMHATG ARRRSSYAPA GCPSERGEIS TGPVQALSTQ RRSDAGAPPD ALTGRLGGGA 300 LLPSGAFAPD RPPSRAAPPP SSRAPMAARG GGGATTRHVT IGSAPPCPTV GTPPMDGQRP 360 SFPHEWSVVR GRRERTAPSI RWHYAAVKRP MRRGAQSERD LRCAHAKSSE DCATSQKVRA 420 GSSLTHARPS ISAATCPDYC SHADTVPAKR APGLHTPQGR AGWWSLRPPL RRSPQWLNKT 480 TARGHRGIGR GRQPRLVGDP IRRVDSGNHS PTFVFRSPQK TYPNPQNHPI EPVAHQSPAS 540 TPHVAARLPS VLRSQGLLLV FLHATQLLPP RFGGSVSCSS RSLRSISFRS DSSWYRSKYC 600 SRRHLSPRSE SCFSQSSKTV KVPAGGAAAA AAAPAVAASV RTRQRRGRAR LYCLPFVSLL 660 LCSSCSRSPA AFLFSFLKKV NRSSLLRPLL RSPAALACSP APLASLLPSF GLYSPADPQS 720 RTEGIHPSIT SLLVLAMSRS RTVRIFWDDP DVTDSSGDED AYGARKVGRL VRELPRVEAA 780 AAAAAAAAAG GMLEQSSAGD GERGRRPAAG GLGGCSGGAR RRLGSKGAGS VAPGTKFRGV 840 RRRPWGKYAA EIRDPWRGVR VWLGTFDTAE EAARVYDSAA IQLRGPNATT NFSSAAAADS 900 GGSGGGHQDQ VTAGYESGTE SSPAVSSPTS VLRKVPSLSS LAEDKDESDA ATGEPAAEGS 960 LAALEELGEF VPFEDAPVYA SSSGFWDFEP DAAGFLYAEP SSPETAWDVA AATTSASSGD 1020 ASWPAPSVHQ ENDYFQDLRD LFPLNPLPAI F |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 6e-20 | 827 | 892 | 5 | 71 | Ethylene-responsive transcription factor ERF096 |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 386 | 392 | VKRPMRR |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1690 | 36 | 97 |