PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01035.1.g00230.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 355aa    MW: 38761.7 Da    PI: 4.8248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01035.1.g00230.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.31.2e-15271322155
                             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                                     s y+GV+++ k+grW A+I  +        + ++lg+f t+eeAa+a++ a+ +++g
  Zmw_sc01035.1.g00230.1.sm.mkhc 271 SIYRGVTRRQKDGRWQARIGLV-----AgtRDIYLGTFKTEEEAAEAYDIAAIEIRG 322
                                     57****************9995.....234************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541715.89E-10182238IPR016177DNA-binding domain
PROSITE profilePS5103211.627182236IPR001471AP2/ERF domain
SMARTSM003809.3E-8182242IPR001471AP2/ERF domain
PRINTSPR003672.9E-6183194IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.3E-9183237IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-17271332IPR016177DNA-binding domain
PfamPF008471.6E-9271322IPR001471AP2/ERF domain
CDDcd000182.12E-22271330No hitNo description
PROSITE profilePS5103218.571272330IPR001471AP2/ERF domain
SMARTSM003801.1E-27272336IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.6E-19272331IPR001471AP2/ERF domain
PRINTSPR003672.9E-6312332IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MEESGEGVKP NHGKEMEKEK ASGESGDEGK MDRTQSINLN SLPAVAAETG NTTHKDGDTY  60
SAVVSEAKDS STGKAKEFSG ADQKKLPKVE QVAYGGEIES HAENPVNEAA LVTVVGDEGR  120
ADCGDEDGRV QVLSIVKKDE PAVEDGDAIN PVTIAGYRQD NADVAASAGI TAARPAGSRS  180
SSFHGVTSRS WIIWLFYNLP QISNCAGSYD TEEKAARAYD VAALKYWGPD TRLNFSVSQY  240
ERELQDIRDL SREECVTYLR RRSSCFSRGA SIYRGVTRRQ KDGRWQARIG LVAGTRDIYL  300
GTFKTEEEAA EAYDIAAIEI RGKNAVTNFD RSNYMDRGMH CIEGEGLRLF ASKPE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1259280RRRSSCFSRGASIYRGVTRRQK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004953856.11e-174AP2-like ethylene-responsive transcription factor AIL1
TrEMBLK3YTI51e-172K3YTI5_SETIT; Uncharacterized protein
STRINGSi017580m1e-173(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118882933