PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

3D Structure |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zmw_sc00992.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 783aa MW: 84976.9 Da PI: 8.5466

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00992.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.2	8.7e-29	522	575	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +r+rWt eLH+rFv av++LGG++kAtPk++l++m+v gLtl+h+kS LQkYR+ Zmw_sc00992.1.g00050.1.am.mk 522 QRVRWTRELHRRFVLAVSELGGADKATPKAVLRVMDVRGLTLHHLKSYLQKYRM 575 7****************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	3.23E-14	520	578	IPR009057	Homeodomain-like
Gene3D	G3DSA:1.10.10.60	7.7E-28	521	579	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	3.5E-21	522	575	IPR006447	Myb domain, plants
Pfam	PF00249	1.4E-5	523	574	IPR001005	SANT/Myb domain
Pfam	PF14379	9.4E-14	637	674	IPR025756	MYB-CC type transcription factor, LHEQLE-containing domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 783 aa Download sequence Send to blast
MMLLPCRGRG REGPGPSSHG SPLPDRRIGI PHVGARTTPA PRLPAFPDSL GPARTHTHAR 60 FPSFENLLFA TALSLVALAL EYGKARNKTR GKEAGNVAEP SPALSLSQAL PAFHAESEAA 120 TIADGGGKKK GKRALAYTAA QAQGSDEHAK DADTTVSVRP SPREKRIVVT DRRSVGQVDE 180 WNGTVCVKRI EREAETRRYR DENDAGSCAC CDPGIGTSLD GHLASEAWPG IVVGDHTSSA 240 GPNTRACAPG VGQKLPLRSM PIATSGDGEG GSLASRAASD EWRSGLDSLI RLSPQKPGAV 300 CQLRQGAAAA GAGRPLRSPS LGVRGKRCGG ETLRLGTEGI RSKEEEGDEF ELYRFRTAER 360 FSPFQVKGVK AKGGNNGGCK RRCMAYWHGP QLPRHRYSLP FPPCRAYPYI YQRRRSRTHS 420 TEEEYICAVE SKETNLLRAQ PVSNSQLAAY KTAPRHHRLP GTCSCCCRWS SLQLRPSRRA 480 SHAGHAADAA TPRDVVLGTL EMSSSGGCYA GQSGGEPAGR PQRVRWTREL HRRFVLAVSE 540 LGGADKATPK AVLRVMDVRG LTLHHLKSYL QKYRMAVSRG LVEVTDDNGE GQNDRSSSSE 600 NQPEEYDEDT VTEMYRTFAN DESEVLCDSS RSLTWIQREV HRNLQEQIEV QRHLQLRIEA 660 QGRYLHSVLR RAEEVLADYS LDLPEAELSE LVSAAASTSS SLSLSPLHYP STASCVTSSS 720 SSEAESKASA KRLCTCADMR ESTVEQSVQS KRGVLQSHRQ QQGDADEAEA DAENGSSGID 780 LNR

Sequence ? help Back to Top

Protein Sequence Length: 783 aa Download sequence Send to blast

MMLLPCRGRG REGPGPSSHG SPLPDRRIGI PHVGARTTPA PRLPAFPDSL GPARTHTHAR  60
FPSFENLLFA TALSLVALAL EYGKARNKTR GKEAGNVAEP SPALSLSQAL PAFHAESEAA  120
TIADGGGKKK GKRALAYTAA QAQGSDEHAK DADTTVSVRP SPREKRIVVT DRRSVGQVDE  180
WNGTVCVKRI EREAETRRYR DENDAGSCAC CDPGIGTSLD GHLASEAWPG IVVGDHTSSA  240
GPNTRACAPG VGQKLPLRSM PIATSGDGEG GSLASRAASD EWRSGLDSLI RLSPQKPGAV  300
CQLRQGAAAA GAGRPLRSPS LGVRGKRCGG ETLRLGTEGI RSKEEEGDEF ELYRFRTAER  360
FSPFQVKGVK AKGGNNGGCK RRCMAYWHGP QLPRHRYSLP FPPCRAYPYI YQRRRSRTHS  420
TEEEYICAVE SKETNLLRAQ PVSNSQLAAY KTAPRHHRLP GTCSCCCRWS SLQLRPSRRA  480
SHAGHAADAA TPRDVVLGTL EMSSSGGCYA GQSGGEPAGR PQRVRWTREL HRRFVLAVSE  540
LGGADKATPK AVLRVMDVRG LTLHHLKSYL QKYRMAVSRG LVEVTDDNGE GQNDRSSSSE  600
NQPEEYDEDT VTEMYRTFAN DESEVLCDSS RSLTWIQREV HRNLQEQIEV QRHLQLRIEA  660
QGRYLHSVLR RAEEVLADYS LDLPEAELSE LVSAAASTSS SLSLSPLHYP STASCVTSSS  720
SSEAESKASA KRLCTCADMR ESTVEQSVQS KRGVLQSHRQ QQGDADEAEA DAENGSSGID  780
LNR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	2e-16	523	579	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	2e-16	523	579	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	2e-16	523	579	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	2e-16	523	579	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	2e-16	523	579	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	2e-16	523	579	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	2e-16	523	579	4	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	2e-16	523	579	4	60	Protein PHOSPHATE STARVATION RESPONSE 1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP11264	30	38