PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00968.1.g00160.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bHLH

Protein Properties

Length: 273aa MW: 27639.1 Da PI: 5.9781

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00968.1.g00160.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.4	6.8e-05	217	240	8	31
HHHHHHHHHHHHHHHHHCTSCCC. CS HLH 8 rErrRRdriNsafeeLrellPkas 31 Er RR+++++ +++L + lP ++ Zmw_sc00968.1.g00160.1.sm.mk 217 TERDRRKKMRTLYSTLHSFLPRLP 240 6********************964 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	4.36E-5	212	244	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence Send to blast
MSQQGANFSQ DVEGSLPGGA GSEGTAGSGS SSAKQAVEII SSGWKPASPV INLPQEVQGT 60 HVGDASPGEF TPEAVVLAGT AGFNSSFSSV KLAAEDGGGG SNPASPLEVQ AGDKTAGSKP 120 PSPVVGLVAH AGEPARPAAV VGAGGSDKGK EKDEPAAEEG AGDIAGSSSK SIKSSSDGDV 180 QGDAKDAPAP AAGGDGSGKR KGKGVTAEAD HALHMWTERD RRKKMRTLYS TLHSFLPRLP 240 EKERGDAGRS KQEQHYRNER SKGWDCGRVP TDQ

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2005	36	91