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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc00964.1.g00090.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
M-type_MADS |
Protein Properties |
Length: 123aa MW: 13689.2 Da PI: 10.4823 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc00964.1.g00090.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 83.5 | 1.3e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
krien+ nrqvtfskRr+g++KKA+ LS+LCda++ vi+f +tg+ly++ss
Zmw_sc00964.1.g00090.1.sm.mk 9 KRIENEANRQVTFSKRRAGMFKKAKGLSILCDAQIGVIVFTNTGQLYDFSS 59
79***********************************************96 PP
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2 | SRF-TF | 54.8 | 1.2e-17 | 57 | 95 | 13 | 51 |
HHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 13 fskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
fs r+g++KKA+ELS+LCda++ vi+f +tg+ly++ss
Zmw_sc00964.1.g00090.1.sm.mk 57 FSSSRAGMFKKAKELSILCDAQIGVIVFTNTGQLYDFSS 95
77789********************************96 PP
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Protein Features
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Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
PROSITE profile | PS50066 | 27.824 | 1 | 61 | IPR002100 | Transcription factor, MADS-box |
SuperFamily | SSF55455 | 1.1E-23 | 1 | 60 | IPR002100 | Transcription factor, MADS-box |
SMART | SM00432 | 1.1E-33 | 1 | 60 | IPR002100 | Transcription factor, MADS-box |
PRINTS | PR00404 | 4.2E-25 | 3 | 23 | IPR002100 | Transcription factor, MADS-box |
Pfam | PF00319 | 1.1E-23 | 10 | 57 | IPR002100 | Transcription factor, MADS-box |
PRINTS | PR00404 | 4.2E-25 | 23 | 38 | IPR002100 | Transcription factor, MADS-box |
PRINTS | PR00404 | 4.2E-25 | 38 | 59 | IPR002100 | Transcription factor, MADS-box |
SuperFamily | SSF55455 | 7.19E-14 | 57 | 97 | IPR002100 | Transcription factor, MADS-box |
Pfam | PF00319 | 5.5E-14 | 57 | 93 | IPR002100 | Transcription factor, MADS-box |
PROSITE profile | PS50066 | 17.507 | 57 | 97 | IPR002100 | Transcription factor, MADS-box |
SMART | SM00432 | 2.5E-6 | 61 | 96 | IPR002100 | Transcription factor, MADS-box |