 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zmw_sc00942.1.g00260.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 175aa MW: 20519.3 Da PI: 8.8598 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zmw_sc00942.1.g00260.1 | genome | ZGD | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 68.5 | 8.5e-22 | 54 | 109 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
+++ +++t+ q++ Le++F+++++p++++r +L+++lgL+ rq+k+WFqNrR+++k
Zmw_sc00942.1.g00260.1.am.mk 54 KKRYHRHTPRQIQMLEAMFKECPHPDENQRMQLSRELGLEPRQIKFWFQNRRTQMK 109
678899***********************************************998 PP
|
| 2 | HD-ZIP_I/II | 63.3 | 6e-21 | 57 | 138 | 3 | 84 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLeke 83
+r + q+++LE +F+e + + +++++l+reLgl+prq++ WFqnrR +k+++ d +L+++ d+++ en ++++
Zmw_sc00942.1.g00260.1.am.mk 57 YHRHTPRQIQMLEAMFKECPHPDENQRMQLSRELGLEPRQIKFWFQNRRTQMKAQHERADNCFLRAENDKIRCENIAMREA 137
3477889*******************************************************************9999876 PP
HD-ZIP_I/II 84 v 84
Zmw_sc00942.1.g00260.1.am.mk 138 L 138
5 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 175 aa
Download sequence Send
to blast |
MSHSPLSSFP SVRRIALEAT GRPPRSTAEV CVRARAAMDF GDDVMEGSDS QRRKKRYHRH 60
TPRQIQMLEA MFKECPHPDE NQRMQLSREL GLEPRQIKFW FQNRRTQMKA QHERADNCFL 120
RAENDKIRCE NIAMREALRN VICPTCGGPH VADDYFDEQK LRMENARLKE EASLF
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
