PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00930.1.g00170.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 640aa    MW: 69134.7 Da    PI: 5.6455
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00930.1.g00170.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.38e-184796255
                           AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  Zmw_sc00930.1.g00170.1.am.mk 47 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 96
                                  799******.7*********32...35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.37E-1847104IPR016177DNA-binding domain
CDDcd000181.18E-2947103No hitNo description
PROSITE profilePS5103219.83647104IPR001471AP2/ERF domain
SMARTSM003801.2E-3347110IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-2747104IPR001471AP2/ERF domain
PfamPF008471.9E-124796IPR001471AP2/ERF domain
PRINTSPR003674.0E-74859IPR001471AP2/ERF domain
PRINTSPR003674.0E-77086IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009723Biological Processresponse to ethylene
GO:0035865Biological Processcellular response to potassium ion
GO:0048528Biological Processpost-embryonic root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 640 aa     Download sequence    Send to blast
MELQFQKPQS HAQQQQCQYQ AVSVVAKETA GKLSRARSKC GGGGGGKFVG VRQRPSGRWV  60
AEIKDTTQKI RMWLGTFETA EEAARAYDEA ACLLRGANTR TNFAAAGGAG NAPPVSPLAS  120
RIRALLHHKK LKKTVARQPD VAFSPPAAAA YRHGGGTGSV AATSTSASTV TTTTSSVSPS  180
SSPSSTTIKF AMTSGGIRTP ILPVPSHHTF TEESACYRPY LLTTGSDEFQ HQYEQSWTLN  240
TSSLPPTDGR DNACSRMPEL EKISPEKDGP ASPPHGEDRV QGGQDFFDAG NDASDSLVRT  300
FWVRFDLLDC SCRGANSVQK CMRKGEQQSR SPAVIAADQR AIAMATAGVS SAAERQRPSC  360
KEEVVQLSRL LGDSPSILAL QRFSSAMDRR VAPSMDAGQD VWVWEVLLPD DHTSSSTMCL  420
LDTTNLSDDR ETKEPMMITP PSSDTDVRDE PVDEFKDIGV VLDESTEPSE EAALPEATDL  480
AAASDGDEGE KPFQSADTKK PDEVADPSAA SDGKEEEKQF QSRDTKESVD DGEFEGEEDD  540
AIKNKKGNGQ ERPECAVFSV GKLKVNGIGA LCPFGVAAAT VCVFLIGGKL HHHHHRHQQQ  600
QRQKIQLQFF GDDDKTRVLH SPTPCDLQRI QQVVQQTSKG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-1342103971Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00521DAPTransfer from AT5G19790Download
Motif logo
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39003273