PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00925.1.g00140.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family C2H2
Protein Properties Length: 336aa    MW: 36854.8 Da    PI: 11.1302
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00925.1.g00140.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2130.00032107129123
                                   EEETTTTEEESSHHHHHHHHHHT CS
                       zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                   y+C  C+ +F r   L  H++ H
  Zmw_sc00925.1.g00140.1.am.mk 107 YPCAMCPLTFGRETALFGHMKAH 129
                                   99*******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.286107129IPR007087Zinc finger, C2H2
PROSITE patternPS000280109129IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MAPKKEPSLS PLLPQYDAIG HRWIICSPSH SRLAQPCAKR VEGRISAGMK SEARPTSREL  60
AAIQRSSALQ ISLVGVSPHR EGKVVGGVNI NEPSIGGFVS SVDGQVYPCA MCPLTFGRET  120
ALFGHMKAHE RAVAVEVISP KRTSNNHHPK LKAAKEASCS VANMPFPKGW VATSRPGLCN  180
HVRTGLRVGL ELVRNLKLAR VVVSHGYPIT STWRMAATLG IAFLLLGCKA VNPPKTTRNN  240
HHPKLKAVKK EASGSVADMT LPKGWVATSR CCLRCIMLSW IHHQQLQRWH AWCEANHASW  300
RISWGSGVLR GAPYTDPAWK SSSSSSYKRR RRPSPR
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2858822