PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00919.1.g00260.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 367aa    MW: 39498 Da    PI: 6.1793
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00919.1.g00260.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.61.5e-29175233259
                                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+ver++++p++++ tY+geHnh 
  Zmw_sc00919.1.g00260.1.sm.mkhc 175 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCAARKQVERCRTEPNTFILTYTGEHNHA 233
                                     799************************998****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.1E-30162235IPR003657WRKY domain
PROSITE profilePS5081132.076169235IPR003657WRKY domain
SuperFamilySSF1182901.83E-25173235IPR003657WRKY domain
SMARTSM007741.4E-35174234IPR003657WRKY domain
PfamPF031067.6E-25176232IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    Send to blast
MEEEHCSNSW DLYAVVRQAC RRRRLSPPPV QVNDPFDSFP PTPSLPPQGP PGAPNPANEK  60
EVDAGWRFPD LRSGDGQDGD ELLRALMAAR PPVPPSLPPP PLSTLPPLPQ QQQQQPVVVT  120
PTAEVPVQAR AGPASARARA QPSGRQVPRA VQRSKRRKNQ VKKVVSHVPA DGSSSDLWAW  180
RKYGQKPIKG SPYPRGYYRC SSSKGCAARK QVERCRTEPN TFILTYTGEH NHAAPTHRNS  240
LAGTTRHKFP SAASPPPPSV VVGSSESQQQ QQPSPSAPST SAGLSPTTPL RTPSMEEEDD  300
EEEDELLVED MEMAGEDELL FLHGDVDSAV PLQPMSSVFD VVDETFLGSP WASTTAGSPA  360
AGAAAGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B7e-20158236280Disease resistance protein RRS1
5w3x_D7e-20158236280Disease resistance protein RRS1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001130964.11e-126uncharacterized protein LOC100192069
TrEMBLA0A1D6QP271e-125A0A1D6QP27_MAIZE; WRKY transcription factor 22
STRINGGRMZM2G038158_P011e-125(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP53583361