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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc00909.1.g00260.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 226aa MW: 25300.9 Da PI: 5.3472 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc00909.1.g00260.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 84.6 | 8.9e-27 | 43 | 132 | 1 | 92 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81
f+kvltpsdv+k++rlv+pk++ae++ + ++++l +ed+ g W+++++y+++s++yv+tkGW+ Fv+a L +gD+v
Zmw_sc00909.1.g00260.1.am.mk 43 FDKVLTPSDVGKLNRLVVPKQHAERFFPEAGNGTQLCFEDRAGAPWRFRYSYWGSSQSYVMTKGWSLFVRAASLAAGDTVS 123
89************************666678889********************************************** PP
EEE-SSSEE.. CS
B3 82 Fkldgrsefel 92
F++ ++++
Zmw_sc00909.1.g00260.1.am.mk 124 FSR--GAGGRY 132
*93..345555 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MRMDLSLGTL VEATREVQEE HQADLGHQDR RQHGDAAERE HMFDKVLTPS DVGKLNRLVV 60 PKQHAERFFP EAGNGTQLCF EDRAGAPWRF RYSYWGSSQS YVMTKGWSLF VRAASLAAGD 120 TVSFSRGAGG RYFIDYRHCQ RRCQEISFGD TAAMSAWPWV QRTSSMTGGE GANATNPVSG 180 PPGIRHHDAE VGPSRAKCFR LFGFNVECSR DDDAAMEDEE DVDDDN
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 7e-43 | 37 | 137 | 2 | 111 | B3 domain-containing transcription factor NGA1 |
5os9_B | 7e-43 | 37 | 137 | 2 | 111 | B3 domain-containing transcription factor NGA1 |
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