PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00846.1.g00160.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 919aa MW: 99708 Da PI: 10.5964

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00846.1.g00160.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.3	3.8e-29	566	625	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ k++++pr+Y+rC++a +C vkkkv+rsaed+++++ tYegeHnh Zmw_sc00846.1.g00160.1.am.mk 566 VKDGYQWRKYGQKVTKDNPCPRAYFRCSFApSCLVKKKVQRSAEDKTILVATYEGEHNHG 625 58*************************99**************************5 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50811	26.05	561	627	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	5.0E-28	564	627	IPR003657	WRKY domain
SuperFamily	SSF118290	6.93E-25	565	627	IPR003657	WRKY domain
SMART	SM00774	1.7E-34	566	626	IPR003657	WRKY domain
Pfam	PF03106	1.4E-23	567	624	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 919 aa Download sequence Send to blast
MQVSDGDGGQ HQPPPPQEKR DGRTDGRSRR RVNARLRDRD GEARTNGRMD GGCRFRCAGG 60 DEPEPGVRLI DVISPFDTAR LSPSINLEEN KRSTCAAVGT KPKTIMTSLL AKPVDSARVL 120 VTGAQKSFWD QVKLLHIPLS GSDGGDAPGF LRPRSSTWKV SIDYEHAGTP QLFSVLEVHQ 180 LIQLHSRLLN VRNFQARLEN LDASRAPDQR RREREQSAAC AKKMEETPPE RKGTPPARKP 240 PSRAILAARK GTLRGESGVQ VISLGCFFIA LMISSIAGLG LSVLAESRSD GSSDTILKRE 300 SRPRGPRRRQ SPRCFLSVHP VGPSFLLTKI ATSHVSSSLP FPRGLYIGLT TTEPCLLHSC 360 ATNPSSKTLQ LFIQESFFGQ IVDSSLRAAM DPWIGQPSLS LDLNVGLPTA RPVPAKKALV 420 EENFLPAKKG RGQVEALEAE LRLVSEENSR LSEMLRAAVA KYTELRGHVN DMMAAGHTRQ 480 SSPSEGGSAS PPRKRVRSDS LDTKPLATAA SGFAVPDLME CTSGAAAATA AAVAFHEPGR 540 RIREGCKPKV TRQYVHADPS DLSLVVKDGY QWRKYGQKVT KDNPCPRAYF RCSFAPSCLV 600 KKKVQRSAED KTILVATYEG EHNHGQPTQH DGRNAAAKPQ TSNAAAASAA RALSPPQQKQ 660 QEAAGPSEEV VRKNLAEHMA ATLTRDPGFK AALVSALSGR ILELSPTREW DDGVTCGRST 720 QASLESNPVV RTSPPQPSQI ACYYYIADDD VNLEQISPRF GPRAGGSRAE AGAIAPAVGV 780 APGKSGSHPR QASYTLHRWD GRLVKHGSSG GGGLVNRQHV RATMPPLTRW QNETPRPGLP 840 TSFEPVFSDR PCLSRYTNSK RTPKPAAAFL PRANPRASFA DGLVFFGRHR VRISCRSRID 900 KFRISSGGAV FSSPQPRGR

Sequence ? help Back to Top

Protein Sequence Length: 919 aa Download sequence Send to blast

MQVSDGDGGQ HQPPPPQEKR DGRTDGRSRR RVNARLRDRD GEARTNGRMD GGCRFRCAGG  60
DEPEPGVRLI DVISPFDTAR LSPSINLEEN KRSTCAAVGT KPKTIMTSLL AKPVDSARVL  120
VTGAQKSFWD QVKLLHIPLS GSDGGDAPGF LRPRSSTWKV SIDYEHAGTP QLFSVLEVHQ  180
LIQLHSRLLN VRNFQARLEN LDASRAPDQR RREREQSAAC AKKMEETPPE RKGTPPARKP  240
PSRAILAARK GTLRGESGVQ VISLGCFFIA LMISSIAGLG LSVLAESRSD GSSDTILKRE  300
SRPRGPRRRQ SPRCFLSVHP VGPSFLLTKI ATSHVSSSLP FPRGLYIGLT TTEPCLLHSC  360
ATNPSSKTLQ LFIQESFFGQ IVDSSLRAAM DPWIGQPSLS LDLNVGLPTA RPVPAKKALV  420
EENFLPAKKG RGQVEALEAE LRLVSEENSR LSEMLRAAVA KYTELRGHVN DMMAAGHTRQ  480
SSPSEGGSAS PPRKRVRSDS LDTKPLATAA SGFAVPDLME CTSGAAAATA AAVAFHEPGR  540
RIREGCKPKV TRQYVHADPS DLSLVVKDGY QWRKYGQKVT KDNPCPRAYF RCSFAPSCLV  600
KKKVQRSAED KTILVATYEG EHNHGQPTQH DGRNAAAKPQ TSNAAAASAA RALSPPQQKQ  660
QEAAGPSEEV VRKNLAEHMA ATLTRDPGFK AALVSALSGR ILELSPTREW DDGVTCGRST  720
QASLESNPVV RTSPPQPSQI ACYYYIADDD VNLEQISPRF GPRAGGSRAE AGAIAPAVGV  780
APGKSGSHPR QASYTLHRWD GRLVKHGSSG GGGLVNRQHV RATMPPLTRW QNETPRPGLP  840
TSFEPVFSDR PCLSRYTNSK RTPKPAAAFL PRANPRASFA DGLVFFGRHR VRISCRSRID  900
KFRISSGGAV FSSPQPRGR

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2ayd_A	2e-18	565	627	13	74	WRKY transcription factor 1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1822	38	103