PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00822.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 324aa MW: 35789 Da PI: 6.7812

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00822.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	65.1	1.1e-20	121	182	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE...-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkver...saedpkvveitYegeHnhe 59 +Dgy+WrKYGqK++++ f+r YY+C +Cp+kkkv++ s++d ++e+tY ++H+++ Zmw_sc00822.1.g00020.1.sm.mk 121 KDGYQWRKYGQKNIQNCSFARYYYKCNGDrRCPAKKKVQQqdgSSDDAPMFEVTYVNDHTCH 182 7***********************9988****9833356899**********96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	4.5E-23	105	183	IPR003657	WRKY domain
PROSITE profile	PS50811	15.032	115	179	IPR003657	WRKY domain
SuperFamily	SSF118290	1.12E-19	117	182	IPR003657	WRKY domain
SMART	SM00774	1.6E-25	120	183	IPR003657	WRKY domain
Pfam	PF03106	9.6E-22	121	182	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 324 aa Download sequence Send to blast
MAFDPVTKLS DVLTGGYHLN SRLQALLGSP LDFRRQEEAK AFSQELSRVF MVSLSMLKQT 60 YDSKRNLNDM APVIRTGDSF GFCTLAKERV TISREGVTSH KNSTREQEFT RKEITSTPHS 120 KDGYQWRKYG QKNIQNCSFA RYYYKCNGDR RCPAKKKVQQ QDGSSDDAPM FEVTYVNDHT 180 CHHVDDGSSQ KSLPQTTTTG QQRSGFEAAA NRNSVALFDP LHRVGSAEEN EAIVSCLATV 240 ISGTAPSSPG AEPVAPPVYL PQSIAGASMV ADGAMAMLEL DTGFSWGHPS SPLCPAEVIM 300 GFRDDVHMVD AARFGDTVWP QYYT

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004972234.1	3e-89	WRKY transcription factor WRKY62
TrEMBL	A0A3L6SIS7	7e-91	A0A3L6SIS7_PANMI; Uncharacterized protein
STRING	Si003782m	1e-88	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13243	26	32