PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00780.1.g00100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | NAC | ||||||||
Protein Properties | Length: 310aa MW: 35618.4 Da PI: 4.5146 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 50.5 | 6.8e-16 | 66 | 118 | 1 | 53 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka 53 lppGfrF Ptdeel+ +yL++k+ + +++ +i+++d+y+++PwdLp +++++ Zmw_sc00780.1.g00100.1.am.mk 66 LPPGFRFFPTDEELIIFYLARKAVDASFTS-ATIRDIDLYSFDPWDLPcQELQE 118 79*************************998.77**************9554433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.89E-18 | 57 | 115 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 11.854 | 66 | 112 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.3E-6 | 67 | 108 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence Send to blast |
MTSPRLGNVL HHESPQAPYV TLNYQLFAVI KWTSSYLRCR VDRSSLRKFV CTRMQGEHHQ 60 RRMERLPPGF RFFPTDEELI IFYLARKAVD ASFTSATIRD IDLYSFDPWD LPCQELQETG 120 DGQHTGDDYD LALMKDEDPS RDRKPETETV HDQQPSPGPG NLLPMEPDRC DQDKDNAAPP 180 AYHPHCAGSQ SGVHAMDRDD KDRPHWQMAH DEEPMMNSGS SCTSPPWPWL LHDDQLGPHG 240 SALQFMQMQS HDADYFLPEL LECDDDCYNE PLNRRGEAQD TSGVMDRRAE MSDASVDSVL 300 LCGFYWNYDF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-13 | 66 | 116 | 17 | 67 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-13 | 66 | 116 | 17 | 67 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-13 | 66 | 116 | 17 | 67 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-13 | 66 | 116 | 17 | 67 | NO APICAL MERISTEM PROTEIN |
3swm_A | 4e-13 | 66 | 116 | 20 | 70 | NAC domain-containing protein 19 |
3swm_B | 4e-13 | 66 | 116 | 20 | 70 | NAC domain-containing protein 19 |
3swm_C | 4e-13 | 66 | 116 | 20 | 70 | NAC domain-containing protein 19 |
3swm_D | 4e-13 | 66 | 116 | 20 | 70 | NAC domain-containing protein 19 |
3swp_A | 4e-13 | 66 | 116 | 20 | 70 | NAC domain-containing protein 19 |
3swp_B | 4e-13 | 66 | 116 | 20 | 70 | NAC domain-containing protein 19 |
3swp_C | 4e-13 | 66 | 116 | 20 | 70 | NAC domain-containing protein 19 |
3swp_D | 4e-13 | 66 | 116 | 20 | 70 | NAC domain-containing protein 19 |
4dul_A | 3e-13 | 66 | 116 | 17 | 67 | NAC domain-containing protein 19 |
4dul_B | 3e-13 | 66 | 116 | 17 | 67 | NAC domain-containing protein 19 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1E5UJH1 | 2e-26 | A0A1E5UJH1_9POAL; NAC domain-containing protein 100 | ||||
STRING | Pavir.J11705.1.p | 2e-25 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP46515 | 2 | 2 |