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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc00768.1.g00040.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
M-type_MADS |
Protein Properties |
Length: 237aa MW: 25360.9 Da PI: 7.7927 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc00768.1.g00040.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 97.9 | 4.3e-31 | 135 | 185 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
krien++nrqvtf+kRrng+lKKA+ELSvLCdae+a++ifss+g+lyeys+
Zmw_sc00768.1.g00040.1.am.mk 135 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEIALVIFSSRGRLYEYSN 185
79***********************************************95 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 237 aa
Download sequence Send
to blast |
MAGSSFSAAE AATEGPLKLP TGTPPSPRNN PSSSLDLSPF PVLFAHKPNM HIQEVQAAPS 60 TDLMVIALLA LMLDSFDLHP CFSSQEIESA LTSVGLNLKD PMSSSPGSGS VGGASAAAAA 120 AAAENKAAGK GKQIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEIA LVIFSSRGRL 180 YEYSNNSPEL FLCVTDACDW FGLGSPLLFL PRYVLSLACI VREEREGDRR REKGRPS
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1egw_A | 2e-17 | 130 | 185 | 3 | 58 | MADS BOX TRANSCRIPTION ENHANCER FACTOR 2, POLYPEPTIDE A |
1egw_B | 2e-17 | 130 | 185 | 3 | 58 | MADS BOX TRANSCRIPTION ENHANCER FACTOR 2, POLYPEPTIDE A |
1egw_C | 2e-17 | 130 | 185 | 3 | 58 | MADS BOX TRANSCRIPTION ENHANCER FACTOR 2, POLYPEPTIDE A |
1egw_D | 2e-17 | 130 | 185 | 3 | 58 | MADS BOX TRANSCRIPTION ENHANCER FACTOR 2, POLYPEPTIDE A |
1n6j_A | 4e-17 | 130 | 192 | 3 | 65 | Myocyte-specific enhancer factor 2B |
1n6j_B | 4e-17 | 130 | 192 | 3 | 65 | Myocyte-specific enhancer factor 2B |
1tqe_P | 3e-17 | 130 | 192 | 4 | 66 | Myocyte-specific enhancer factor 2B |
1tqe_Q | 3e-17 | 130 | 192 | 4 | 66 | Myocyte-specific enhancer factor 2B |
1tqe_R | 3e-17 | 130 | 192 | 4 | 66 | Myocyte-specific enhancer factor 2B |
1tqe_S | 3e-17 | 130 | 192 | 4 | 66 | Myocyte-specific enhancer factor 2B |
3mu6_A | 2e-17 | 130 | 185 | 3 | 58 | Myocyte-specific enhancer factor 2A |
3mu6_B | 2e-17 | 130 | 185 | 3 | 58 | Myocyte-specific enhancer factor 2A |
3mu6_C | 2e-17 | 130 | 185 | 3 | 58 | Myocyte-specific enhancer factor 2A |
3mu6_D | 2e-17 | 130 | 185 | 3 | 58 | Myocyte-specific enhancer factor 2A |
6c9l_A | 3e-17 | 130 | 192 | 4 | 66 | Myocyte-specific enhancer factor 2B |
6c9l_B | 3e-17 | 130 | 192 | 4 | 66 | Myocyte-specific enhancer factor 2B |
6c9l_C | 3e-17 | 130 | 192 | 4 | 66 | Myocyte-specific enhancer factor 2B |
6c9l_D | 3e-17 | 130 | 192 | 4 | 66 | Myocyte-specific enhancer factor 2B |
6c9l_E | 3e-17 | 130 | 192 | 4 | 66 | Myocyte-specific enhancer factor 2B |
6c9l_F | 3e-17 | 130 | 192 | 4 | 66 | Myocyte-specific enhancer factor 2B |
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