PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00744.1.g00220.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 720aa MW: 77306.2 Da PI: 8.8108 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 38.1 | 3.8e-12 | 133 | 184 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 s+++GVr ++ +g ++AeIrdp +r kr ++g+f +eeAa+a++a +++++ e Zmw_sc00744.1.g00220.1.am.mk 133 SRFPGVRLRP-WGTYAAEIRDP----IRkKRKWIGSFLVEEEAAAAYEAQAREYRAE 184 689*******.**********7....246************************9975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 2.2E-5 | 133 | 183 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.95E-12 | 133 | 184 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 8.0E-9 | 134 | 199 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.2E-15 | 134 | 183 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.147 | 134 | 193 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 720 aa Download sequence Send to blast |
MSPALLLLHG SDFPSPSSCT LLQFRQNGAR ACVFRLRIAR PSAVVNLDCT VAFPCSKRAV 60 VAMPAKVFVP LDSSDDEDDQ NIKKEKKVTR EVLIPVMDSK AALVPAKKSK ATKRKTTLLP 120 CDLKGPKKKE PSSRFPGVRL RPWGTYAAEI RDPIRKKRKW IGSFLVEEEA AAAYEAQARE 180 YRAELLAMRA QLPVSQSPAL SSSPSVSCDL PSVSGEKIAQ EAENRIFTEV VDSEPVDDLV 240 LHISDKPRDQ DLSMDVLSGL IEELPISDCI SRADELRHGG DFTSSEDTIL ISDFVDVTQM 300 PLDDDYIALA DISHLPLPIK DPEFDLGAEL DWKACAAARC WPSPAAVKTT TTSSRALDLF 360 LVSIAAAVLL FVASLFLWGF WPGRGRFFIF GAISGVFFTE EKKLRALLPA SALQWVQTAS 420 PAARQKAYSN SSFPYTRRTA VSPDLQSAAP ASVRGHAVAS PPDDHLLLFL GLRGRAVATA 480 FIGAPPGVAA RRAGAPHPDR GEPRDETRSL PEAAESTTAV EALPGAHHGA AARGESVVCA 540 LDEVPDPLCP ALLFLLVAGG GRFVRAAFIP VVSLVLLAGG VVRGYARLDD LLPPRPEAKH 600 DALQSAQQAR QRGERGQHDX XXXXSASSAA AIAGARENRP TPASSIAAAA VSIPSTAGKG 660 CNLRNGKKET ILTPTRHERR DKGIIFLLTL SRCVREQSSE RGKGRKGGGR KPRGGGDAAL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 707 | 715 | GGRKPRGGG |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5020 | 37 | 63 |