PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00742.1.g00270.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 420aa MW: 45877.5 Da PI: 11.8883 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.9 | 1.3e-18 | 102 | 151 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+WvAeIr+p++ r r +lg+f tae+Aa+a+++a++ l+g Zmw_sc00742.1.g00270.1.am.mk 102 RYRGVRQRS-WGKWVAEIREPRK---RSRKWLGTFTTAEDAARAYDRAALLLYG 151 59****999.**********954...5**********************98877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 9.37E-18 | 102 | 157 | No hit | No description |
PROSITE profile | PS51032 | 22.445 | 102 | 159 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.31E-20 | 102 | 159 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.5E-37 | 102 | 165 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 6.5E-12 | 102 | 150 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.1E-29 | 103 | 158 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.6E-10 | 103 | 114 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.6E-10 | 125 | 141 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006970 | Biological Process | response to osmotic stress | ||||
GO:0009414 | Biological Process | response to water deprivation | ||||
GO:0009738 | Biological Process | abscisic acid-activated signaling pathway | ||||
GO:0009744 | Biological Process | response to sucrose | ||||
GO:0009749 | Biological Process | response to glucose | ||||
GO:0010119 | Biological Process | regulation of stomatal movement | ||||
GO:0010353 | Biological Process | response to trehalose | ||||
GO:0010449 | Biological Process | root meristem growth | ||||
GO:0010896 | Biological Process | regulation of triglyceride catabolic process | ||||
GO:0031930 | Biological Process | mitochondria-nucleus signaling pathway | ||||
GO:0032880 | Biological Process | regulation of protein localization | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0048316 | Biological Process | seed development | ||||
GO:0048527 | Biological Process | lateral root development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 420 aa Download sequence Send to blast |
LHAHACSLYC TFSLSLRPLY LTTAPLHQAH PPRPPPPSLA RPPQRKAQHH HPSLSPFTHI 60 PAPLPRPMEP NSQQLPAATA AESSCGGGNR SRKGGPENGN FRYRGVRQRS WGKWVAEIRE 120 PRKRSRKWLG TFTTAEDAAR AYDRAALLLY GPRAHLNLTA PPPELLASAQ RASSNAHSST 180 SAPPPLRPIL PRPAAASTNQ RSPAGFQHHH HHQQQVQLHL LAPQLPAQPP PPLYYPSTAT 240 ASTVTTTAQP QEPAVAPLSM APLASASVTE EQALTPDEAA AAAGKQSSGS CRRERGAKVE 300 PAVRGQKKIY IYPRISFAGR FGLAAVSMRP RGGSEILLRS PEYVQCQSPH ACLPPFVTAT 360 AARALLIHSV AGRSLRRHLG RRSIGRSTSR LSRRRCVLVH FFRVLMGTFF ATFLRMRHDN |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 2e-16 | 103 | 158 | 6 | 62 | ATERF1 |
3gcc_A | 2e-16 | 103 | 158 | 6 | 62 | ATERF1 |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00674 | SELEX | Transfer from GRMZM2G093595 | Download |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13303 | 26 | 32 |