PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00731.1.g00260.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Trihelix
Protein Properties Length: 424aa    MW: 45047.1 Da    PI: 6.4009
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00731.1.g00260.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix28.25e-09162240170
                      trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.........rergferspkqCkekwenlnkrykkikegekk 70 
                                   +Wt  e+laL++ +  +++  +r+ ++ ++W+ v++++          +   +r + +Ck +we l+ +y +++++e +
  Zmw_sc00731.1.g00260.1.am.mk 162 EWTPAETLALVAEVAAVDDGWSRSVSAFQKWAMVAENLaasevfasgPALRGKRAAGECKRRWEALAAEYGAVRRWEVR 240
                                   5*******************************************98888888***********************9976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.679163228IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MASMQRASQR SRSPPVWGPP LSRPASDTTS ARDPQGSTWL RTRAPRRTRT VSTLARASSS  60
LPHRLTAPAP AHRIAPASMD PPAADSRCVV QALRASSNTR PAPPPPIKSL HSPAAKDHAP  120
GASSSSSRPP KPKRRLPRPT ALPLGPAPPS PRRTRSGGSA PEWTPAETLA LVAEVAAVDD  180
GWSRSVSAFQ KWAMVAENLA ASEVFASGPA LRGKRAAGEC KRRWEALAAE YGAVRRWEVR  240
TGGGYWKMST AARRKAGLPS EFDAEVYGTM DALVRVEEAL LANAVAGGGA GEEVEGLVGS  300
GAGVAVGEEN RGEPEICKEQ VKKDELVDEV QKDESGDEEE DEDGRDDEEA TKADPGNADA  360
SNTIEASKYA DENHTPSYSL SPDAMGTTRQ KADDLIKSLG GLLSYLNQFT ELIKETGFEN  420
VGMT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012701598.11e-105trihelix transcription factor ASR3
TrEMBLA0A368PHJ71e-104A0A368PHJ7_SETIT; Uncharacterized protein
STRINGSb04g004960.11e-104(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63532433