PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00731.1.g00260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Trihelix | ||||||||
Protein Properties | Length: 424aa MW: 45047.1 Da PI: 6.4009 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 28.2 | 5e-09 | 162 | 240 | 1 | 70 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.........rergferspkqCkekwenlnkrykkikegekk 70 +Wt e+laL++ + +++ +r+ ++ ++W+ v++++ + +r + +Ck +we l+ +y +++++e + Zmw_sc00731.1.g00260.1.am.mk 162 EWTPAETLALVAEVAAVDDGWSRSVSAFQKWAMVAENLaasevfasgPALRGKRAAGECKRRWEALAAEYGAVRRWEVR 240 5*******************************************98888888***********************9976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 6.679 | 163 | 228 | IPR017877 | Myb-like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009506 | Cellular Component | plasmodesma |
Sequence ? help Back to Top |
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Protein Sequence Length: 424 aa Download sequence Send to blast |
MASMQRASQR SRSPPVWGPP LSRPASDTTS ARDPQGSTWL RTRAPRRTRT VSTLARASSS 60 LPHRLTAPAP AHRIAPASMD PPAADSRCVV QALRASSNTR PAPPPPIKSL HSPAAKDHAP 120 GASSSSSRPP KPKRRLPRPT ALPLGPAPPS PRRTRSGGSA PEWTPAETLA LVAEVAAVDD 180 GWSRSVSAFQ KWAMVAENLA ASEVFASGPA LRGKRAAGEC KRRWEALAAE YGAVRRWEVR 240 TGGGYWKMST AARRKAGLPS EFDAEVYGTM DALVRVEEAL LANAVAGGGA GEEVEGLVGS 300 GAGVAVGEEN RGEPEICKEQ VKKDELVDEV QKDESGDEEE DEDGRDDEEA TKADPGNADA 360 SNTIEASKYA DENHTPSYSL SPDAMGTTRQ KADDLIKSLG GLLSYLNQFT ELIKETGFEN 420 VGMT |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012701598.1 | 1e-105 | trihelix transcription factor ASR3 | ||||
TrEMBL | A0A368PHJ7 | 1e-104 | A0A368PHJ7_SETIT; Uncharacterized protein | ||||
STRING | Sb04g004960.1 | 1e-104 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6353 | 24 | 33 |