PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00729.1.g00070.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 540aa    MW: 56289 Da    PI: 6.1913
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00729.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.51.6e-29321379259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                   +D+++WrKYGqK++kgs+fpr+YY+Cts+ +Cp++k+ve+s++dp+++++ Y+geH h+
  Zmw_sc00729.1.g00070.1.am.mk 321 SDKWSWRKYGQKPIKGSPFPRGYYKCTSNkDCPARKQVEQSSSDPNTLIVSYSGEHCHS 379
                                   79**************************99***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081129.23315381IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.7E-29315381IPR003657WRKY domain
SuperFamilySSF1182903.01E-25316381IPR003657WRKY domain
SMARTSM007742.4E-34320380IPR003657WRKY domain
PfamPF031061.9E-24322378IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 540 aa     Download sequence    Send to blast
MQAAAAGSAI CPGSGGPRVY VHAKGRGQRA PHGPHVSASA WAMARPAGAR SAQSPQPPRK  60
LPPGTYTTFR KKGVGPDGYE PARPDQPLVG MAANRPSIVL YNEDPSPPSL SHSHRSAPPL  120
PSIIEEAREL DRGAGPMEGD GGWHYGGHGY NNWDLDAVVR LGGGGGNAAL EPFQDDPILA  180
LLQPQQDVLP GALPPPQQDV MPDALPQQQL GVLPDANPWQ ELQGAMDLPM AADPAFADLD  240
AFLSDPVFAA PQSPPPPSPR NEAPAPQQAP AAEPPALGKA AAEPSSDAGA GSSRPKHARR  300
SRKDMEAKYV VTVPAPYLPS SDKWSWRKYG QKPIKGSPFP RGYYKCTSNK DCPARKQVEQ  360
SSSDPNTLIV SYSGEHCHSP PTNRNSRAGI MRSSSRAPGA AVGGGSASQP AAPQLVLPAP  420
AAAAPPPAPP RSVYMDFGKD DDDALALQAL IDDAVLAPEN AFLFLNPDYV APAPVNAAGG  480
EGNQPLPIPL ENMATDVSRG TGSGTDGGQA PIPTNVAMDR FFGSPWKAAW PEAAPGPWGM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B3e-17304382280Disease resistance protein RRS1
5w3x_D3e-17304382280Disease resistance protein RRS1
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP3493034