PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00727.1.g00110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Trihelix | ||||||||
Protein Properties | Length: 650aa MW: 70011.7 Da PI: 10.3793 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 38.4 | 3.2e-12 | 364 | 463 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.............rergferspkqCkekwenlnkrykkikege 68 +W+++ + L+ea++ ++ +r+klk +W ++++ + + ++p+qCk+k+e+++kry+++ + Zmw_sc00727.1.g00110.1.am.mk 364 EWSESGIVRLLEAYEAKWLLRNRAKLKWSDWIDIASEVsaycaedtaatgkPGGNSAKTPNQCKNKIESMKKRYRAESAAV 444 5******************************99999999999*******966666799*****************998766 PP trihelix 69 kkr.tsessstcpyfdqle 86 + + + ++++f +++ Zmw_sc00727.1.g00110.1.am.mk 445 ARAgPAAAGPSWRFFARMD 463 66536778889*****997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 3.0E-13 | 362 | 464 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 650 aa Download sequence Send to blast |
MEELDCMTWV PLSLDLSTFL ILSFAQLRSS KFRCHSSSTS GNNLSWFAGT CVGFTSVGTS 60 KSDRIAYTAT FLIEQDAFLP VLPQMVTVNR CSRDPRTFRG VISMPAGDGE KDAGCHQPRA 120 SGSRKRGRHQ PRAVRRLPRA AAALLAVENE ARPRARGRAP RPPLPPSAVV ELPSTALPAA 180 PDAKNPPLIR ANAKNPPLIR ARQKNSSLSA DGRTDAFPTA AASSRCAPRA GRGRAELPAP 240 VSPPLCAAPG CPVPTTSSSR PLFLHGSRFP LTANSTSAQP FFRAFGSSVR SRSAQPLLAL 300 SLFSRPRLLL TPLARRPLSF AVLRSLPSPA AEFDHFLGSG SMDGLAPDAD AAPLAAAPPQ 360 KRDEWSESGI VRLLEAYEAK WLLRNRAKLK WSDWIDIASE VSAYCAEDTA ATGKPGGNSA 420 KTPNQCKNKI ESMKKRYRAE SAAVARAGPA AAGPSWRFFA RMDGLLKGPA GCSGQAQQAP 480 AKAELPDPGP GAFADLMNID ANGSVPEKAD KADNSVHKEI RTADSDANVS SPRSKVANED 540 ADEEDKLWDM PKKRKSTEFA IAKSIELLAS SFLKVEHARM EMYRETERMR IEAEIKKGEM 600 ELKRTEIMAK THLQIAKLFA KRLKEGGGRT GGSSSVTAEV DTLTKKGEND |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7333 | 33 | 46 |