 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zmw_sc00725.1.g00040.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 248aa MW: 27458.2 Da PI: 9.0761 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zmw_sc00725.1.g00040.1 | genome | ZGD | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 50.5 | 3.5e-16 | 98 | 153 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HH.HHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsae.ereeLAkklgLterqVkvWFqNrRakek 56
rk+ ++tkeq Le+ F+++++++ + ++ LA++l+L rqV vWFqNrRa+ k
Zmw_sc00725.1.g00040.1.am.mk 98 RKKLRLTKEQSALLEDRFKEHSTLNPQkQKVALANQLNLRPRQVEVWFQNRRARTK 153
78889*******************97526789**********************98 PP
|
| 2 | HD-ZIP_I/II | 118.7 | 3.3e-38 | 98 | 187 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLep.erKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerL 80
+kk+rl+keq++lLE+ F+e+++L+p ++Kv+la++L+l+prqv+vWFqnrRARtk+kq+E+dye Lkr++++l+een++L
Zmw_sc00725.1.g00040.1.am.mk 98 RKKLRLTKEQSALLEDRFKEHSTLNPqKQKVALANQLNLRPRQVEVWFQNRRARTKLKQTEVDYELLKRCCETLTEENRNL 178
69***********************94589*************************************************** PP
HD-ZIP_I/II 81 ekeveeLre 89
++e +Lr+
Zmw_sc00725.1.g00040.1.am.mk 179 HRELLQLRA 187
*******94 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MEHEDVGLAL GLSLSSGHHG PKERRPSPST QLRALEPSLS LSIKADDGSQ TAQVRPLIGA 60
VKRELPVEED EYGPMDRAFY SAAPPAAAAD DDEGCNSRKK LRLTKEQSAL LEDRFKEHST 120
LNPQKQKVAL ANQLNLRPRQ VEVWFQNRRA RTKLKQTEVD YELLKRCCET LTEENRNLHR 180
ELLQLRALTH PHRAAFFMPA TALSVCPSCE RLAGAPSATA VVADRQPKAA GTRRAAPLFS 240
TFTKSAAC
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 96 | 102 | SRKKLRL |
| 2 | 147 | 155 | RRARTKLKQ |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
