PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00698.1.g00100.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 515aa MW: 55107.8 Da PI: 4.3474 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.5 | 7.8e-19 | 60 | 109 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d ++ r++lg+f+taeeAa+a+++a+ l+g Zmw_sc00698.1.g00100.1.sm.mk 60 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 109 789******.7*********33....35**********************99998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 19.559 | 60 | 117 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.4E-13 | 60 | 109 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 4.0E-35 | 60 | 123 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.38E-19 | 60 | 117 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 4.1E-27 | 60 | 116 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.56E-28 | 61 | 116 | No hit | No description |
PRINTS | PR00367 | 8.9E-8 | 61 | 72 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 8.9E-8 | 83 | 99 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 515 aa Download sequence Send to blast |
MARKRKAFDA LGDIDGGEDA LNPPPSLVST MDACTWSSGG SMVAAVAVAA RQQQQRGRKR 60 FVGVRQRPSG RWVAEIKDTI QKIRVWLGTF DTAEEAARAY DEAACLLRGA NTRTNFWPRP 120 SQAVAAHPVA PPAHVPTTPA LPPKVTNLLL LRLRARNQQL LNATAAQQEA AMLPRGQSCH 180 EAYGGDGEEC GFQVDDYLSH DCGSDGTGSS LEMEDEEAEE EEEELDFQFM DAHVASPAAT 240 GIECSPFEVV AAELGSSVVD AEDGEPATAV QELIRRIDYE RKVSASLYAL NGVSECLKMR 300 LGSTSAGAAM RDQLSGLREA CRKKQHEAVP AQQQHQEQEP AAETAVDREA GQEAYSGSDG 360 GGDMEVVRAS PSEASGVEDG DVLWSSLDLA PIYPLYSGNY QQIEALASEC LDQAFGEQVQ 420 MLPAEDHGPA PTDRSDSALY LRRTEETDAE PVERARGETL GRCVGVSGED SAGEVRAELL 480 HGAHGAPEHA LAATTIVRVG VEESRGPRGI TAEAE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025809285.1 | 1e-128 | ethylene-responsive transcription factor ERF118-like | ||||
TrEMBL | A0A1E5WFR2 | 1e-145 | A0A1E5WFR2_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Cb00448.1.p | 1e-127 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5482 | 30 | 52 |