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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | Zmw_sc00664.1.g00050.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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| Family | GeBP | ||||||||
| Protein Properties | Length: 328aa MW: 37504.2 Da PI: 4.156 | ||||||||
| Description | GeBP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF573 | 37.1 | 8.7e-12 | 154 | 241 | 4 | 97 |
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfske 83
+++ws++D + +L l d++ k+++ p + +++a+ + k+ ++++ ++l Ki++LK +k++vkk +++
Zmw_sc00664.1.g00050.1.am.mk 154 RKVWSNNDAVRILELLGDYRRKHDTLPENkHLEAVLRGQLKR--VQYTLKDLNAKIKSLKSLYKRNVKK-----ARLPTNA 227
689*****************9999877664666666555444..5778899******************.....667799* PP
DUF573 84 hdqkifelskkiWg 97
hd+ +f lsk++Wg
Zmw_sc00664.1.g00050.1.am.mk 228 HDRRVFLLSKQVWG 241
*************9 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| Pfam | PF04504 | 4.4E-14 | 154 | 241 | IPR007592 | Protein of unknown function DUF573 |
| Sequence ? help Back to Top |
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| Protein Sequence Length: 328 aa Download sequence Send to blast |
MAPKRRALPP PPSVVEPSEM TGTSSGSDEL EEVIAPSPRA RSPKKNKAAP PLQHPEASDK 60 EEEADGEEEE EEQQEETDGE EEDDGNDEEA DGEEKEEEAE ADGEEEEEEE EEEEEEEEEE 120 EEEEEEEKEE EEAVGKEEDE EEEVRIVPAA SFYRKVWSNN DAVRILELLG DYRRKHDTLP 180 ENKHLEAVLR GQLKRVQYTL KDLNAKIKSL KSLYKRNVKK ARLPTNAHDR RVFLLSKQVW 240 GPVANPADAT VPADFEEMCA MFPYLGDVLK ELKTENPGVF NKEFSLIPKE KARALDKKFK 300 EEVEEEIKVQ ENAYKVKNKV LKAIMGLI |
| Orthologous Group ? help Back to Top | |||
|---|---|---|---|
| Lineage | Orthologous Group ID | Taxa Number | Gene Number |
| Monocots | OGMP35732 | 3 | 4 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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