PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00662.1.g00200.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GRAS
Protein Properties Length: 235aa    MW: 25399.1 Da    PI: 10.1278
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00662.1.g00200.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS63.83.4e-209218187173
                          GRAS  87 vsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetge 163
                                    sP+++++  +aN aI+eav  ++++H +Dfd+s + Q +aL q La+R+ +  sl++T++ +p+s     ++++l ++ge
  Zmw_sc00662.1.g00200.1.am.mk  92 GSPCFRLALHAANVAIVEAVGDHRAIHLVDFDVSAP-QHAALVQYLADRRVPGTSLKVTAITDPSSPfaqsQTTTLPAVGE 171
                                   59*******************************987.99************************99888999999******* PP

                          GRAS 164 rLakfAeelg 173
                                   rL+k+A+++g
  Zmw_sc00662.1.g00200.1.am.mk 172 RLKKLADRVG 181
                                   ******9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098510.7141235IPR005202Transcription factor GRAS
PfamPF035141.2E-1792181IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MRVICLILLH ILITFVISIQ KAQTCPLPPR LSPVHSCRES TPPAPHPDSY TPVFQPPAAS  60
PPWSHLRGHA WRWPARGEQR GPGGADCSGV DGSPCFRLAL HAANVAIVEA VGDHRAIHLV  120
DFDVSAPQHA ALVQYLADRR VPGTSLKVTA ITDPSSPFAQ SQTTTLPAVG ERLKKLADRV  180
GNAGLDDGGS QGRGPRGRRE LLQHLCSAQS QKGTRRQRQV VAVPFFFFLI VGKTD
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2841523