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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00656.1.g00210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 242aa MW: 25261.2 Da PI: 4.4671 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.5 | 2.4e-16 | 23 | 71 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ykGVr ++ +g+Wv+e+r p g ++r++lg++ tae Aa+a++aa ++l+g Zmw_sc00656.1.g00210.1.am.mk 23 YKGVRMRS-WGSWVSEVRAP---GAKTRIWLGSHSTAEAAARAYDAALLCLRG 71 9****998.*******9998...445*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF54171 | 2.29E-16 | 22 | 82 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 6.8E-29 | 22 | 87 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.784 | 22 | 81 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.6E-26 | 22 | 81 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.1E-10 | 23 | 71 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.1E-8 | 23 | 34 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.16E-14 | 23 | 83 | No hit | No description |
PRINTS | PR00367 | 3.1E-8 | 45 | 61 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
MVKTAALCND TAAAKWNGGK RTYKGVRMRS WGSWVSEVRA PGAKTRIWLG SHSTAEAAAR 60 AYDAALLCLR GSAAAADLNF PVQFPVNDIP HAAMSPKSIQ RVAAAAAAAT SATAFASRAD 120 DADVACCSGD DSTPACSSSS GSDASAVSSP GSTVTSEAET DAACCHGDQK LRDGDVVDYS 180 LLEDIDAYFP SPKCMEYAMM DPCSAFFAPK NAPTPMAMMS DDDVCWLDGD HVALWAFSTL 240 DC |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004964908.1 | 1e-77 | ethylene-responsive transcription factor ERF014 | ||||
TrEMBL | K3Y1B3 | 3e-76 | K3Y1B3_SETIT; Uncharacterized protein | ||||
STRING | Si007977m | 5e-77 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3197 | 34 | 69 |