PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc00634.1.g00290.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

ERF

Protein Properties

Length: 515aa MW: 55378.2 Da PI: 4.3616

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc00634.1.g00290.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.5	7.8e-19	60	109	2	55
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d ++ r++lg+f+taeeAa+a+++a+ l+g Zmw_sc00634.1.g00290.1.sm.mk 60 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 109 789****.7*****33....35********************99998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF54171	4.97E-19	60	117	IPR016177	DNA-binding domain
PROSITE profile	PS51032	19.559	60	117	IPR001471	AP2/ERF domain
SMART	SM00380	4.0E-35	60	123	IPR001471	AP2/ERF domain
Pfam	PF00847	1.4E-13	60	109	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	4.1E-27	60	116	IPR001471	AP2/ERF domain
CDD	cd00018	1.38E-28	61	116	No hit	No description
PRINTS	PR00367	8.9E-8	61	72	IPR001471	AP2/ERF domain
PRINTS	PR00367	8.9E-8	83	99	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence Send to blast
MARKRKAFDA LGDIDGGEDA LNPPPSLVST MDACTWSSGG SMVAAVAVAA RQQQQRGRKR 60 FVGVRQRPSG RWVAEIKDTI QKIRVWLGTF DTAEEAARAY DEAACLLRGA NTRTNFWPRP 120 SQAVATHPVA PPAHVPTTPA LPPKVTNLLL LRLRARNQQL LDATAAQQEA AMLLRGQSCH 180 EAYGGDGEEC GFQVDDYLSH DCGSDGTGSS LEMEDEEAEE EEEELDFQFM DAHVASPAAT 240 GIECSPFEVV AAELGSSVVD AEDGEPATAV QELIRRIDYE RKVSASLYAL NGVSECLKMR 300 LGSTSAGAAM RDQLSGLREA CRKKQHEAVP AQQQHQEQEP AAETAVDREA GQEACSGNDG 360 GGDMEVVRAS PSEASGVEDG DVLWSSLDLA PIYPLYSGNY QQIEALASEC LDQAFGEQVQ 420 MLPAEDHEPA PTDRSDSALY LRRTEETDAE PVERARGETL GRCVSVSGED SAGEVRAELL 480 HGAHGAPEHA LPAATIVRVR VEESRGRRGI TAEAE

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence Send to blast

MARKRKAFDA LGDIDGGEDA LNPPPSLVST MDACTWSSGG SMVAAVAVAA RQQQQRGRKR  60
FVGVRQRPSG RWVAEIKDTI QKIRVWLGTF DTAEEAARAY DEAACLLRGA NTRTNFWPRP  120
SQAVATHPVA PPAHVPTTPA LPPKVTNLLL LRLRARNQQL LDATAAQQEA AMLLRGQSCH  180
EAYGGDGEEC GFQVDDYLSH DCGSDGTGSS LEMEDEEAEE EEEELDFQFM DAHVASPAAT  240
GIECSPFEVV AAELGSSVVD AEDGEPATAV QELIRRIDYE RKVSASLYAL NGVSECLKMR  300
LGSTSAGAAM RDQLSGLREA CRKKQHEAVP AQQQHQEQEP AAETAVDREA GQEACSGNDG  360
GGDMEVVRAS PSEASGVEDG DVLWSSLDLA PIYPLYSGNY QQIEALASEC LDQAFGEQVQ  420
MLPAEDHEPA PTDRSDSALY LRRTEETDAE PVERARGETL GRCVSVSGED SAGEVRAELL  480
HGAHGAPEHA LPAATIVRVR VEESRGRRGI TAEAE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025809285.1	1e-129	ethylene-responsive transcription factor ERF118-like
TrEMBL	A0A1E5WFR2	1e-146	A0A1E5WFR2_9POAL; Uncharacterized protein
STRING	Pavir.Cb00448.1.p	1e-128	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5482	30	52