PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc00620.1.g00290.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 372aa MW: 39330.7 Da PI: 4.8232 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 28.2 | 4.9e-09 | 48 | 85 | 1 | 41 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaee 41 + ++GVr++ grWv+e+r+p g + r +lg++ e Zmw_sc00620.1.g00290.1.am.mk 48 PVFRGVRRRGAAGRWVCEVRVP---GrRGCRLWLGTYRR-EA 85 579******************9...6445********76.55 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 2.3E-5 | 48 | 83 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.8E-12 | 49 | 87 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 0.017 | 49 | 103 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.18E-7 | 49 | 86 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 14.381 | 49 | 250 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.8E-4 | 211 | 256 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.58E-9 | 213 | 252 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 6.4E-14 | 215 | 252 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 372 aa Download sequence Send to blast |
MDMGLFHEQH SSSSSSSSEN NAAGLSSSPG PAKKRPAGRT KFRETRHPVF RGVRRRGAAG 60 RWVCEVRVPG RRGCRLWLGT YRREAASGTA AGAVNDEVTP SASTEPSAVG ISVSCFDATV 120 PADRCVLQVK ADEPAALNGF GIFDPDWFGD MDLDMYYANL AQALLLEPPP LGAWQHGDGT 180 DGTRTAQHLH AAAFPFPAKL STNLSLPAAL TRQHCTELWL GTFATPEAAA RAHDAAAIAV 240 SGRAACLNFA DSAWLLPPLL PPPGVMSSAR EVKGAVAEAI EALRRRSAET SDEENGCASR 300 PAVDDGGSSP AGKPSSDFAF EFDDGFMFGG MDDAESYYAS LAQGLPVEPP ATAASWEDCE 360 SGGTEMALWS YY |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3'. Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Confers resistance to high salt, cold and drought stress (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025802908.1 | 1e-41 | dehydration-responsive element-binding protein 1B-like | ||||
Swissprot | Q8GUW4 | 1e-28 | DRE1B_ORYSI; Dehydration-responsive element-binding protein 1B |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP196 | 36 | 261 |