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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc00619.1.g00410.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 273aa MW: 29521.9 Da PI: 5.8762 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc00619.1.g00410.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 59 | 1e-18 | 15 | 61 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
g+W++eEd++lv +v+q+G ++W++ ++ g+ R++k+c++rw +yl
Zmw_sc00619.1.g00410.1.sm.mkhc 15 GAWSAEEDQRLVAYVRQHGHPNWRALPKQAGLLRCGKSCRLRWINYL 61
68*****************************99************97 PP
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2 | Myb_DNA-binding | 50.3 | 5.7e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T++E+ l+++++++lG++ W++Ia+ ++ gRt++++k+ w+++l
Zmw_sc00619.1.g00410.1.sm.mkhc 67 RGNFTADEEGLIIRLHHELGNR-WSAIAAQLP-GRTDNEIKNVWHTHL 112
89********************.*********.************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 273 aa
Download sequence Send
to blast |
MGRAPCCEKE GLRWGAWSAE EDQRLVAYVR QHGHPNWRAL PKQAGLLRCG KSCRLRWINY 60 LRPDIKRGNF TADEEGLIIR LHHELGNRWS AIAAQLPGRT DNEIKNVWHT HLKKRLENAD 120 GGGGRKKQAR KSKTAKKAAQ AAADDVEGAA ASPFTDTAAS PGLSSSGVAC STATESTAAA 180 SSVDNAATTS ASRQVAVKAE EIESFSTAEF PPIDESFLTS AEVMDMDLGA MDEELGLASS 240 APSTGDHEDM EFWLQMLLES GDMSSGVERH VNV
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator involved in cold stress response (PubMed:14675437, PubMed:20807373, PubMed:22246661). Regulates positively the expression of genes involved in reactive oxygen species (ROS) scavenging such as peroxidase and superoxide dismutase during cold stress. Transactivates a complex gene network that have major effects on stress tolerance and panicle development (PubMed:20807373). {ECO:0000269|PubMed:14675437, ECO:0000269|PubMed:20807373, ECO:0000269|PubMed:22246661}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold stress. {ECO:0000269|PubMed:14675437, ECO:0000269|PubMed:20807373, ECO:0000269|Ref.2}. |