PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc00583.1.g00350.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 303aa    MW: 33419.7 Da    PI: 9.966
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc00583.1.g00350.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY66.73.6e-21209266258
                                   --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSS.TTEEEEEEES--SS CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaed.pkvveitYegeHnh 58 
                                   +Dgy+W+KYGqK +k+ +  rsY+rC ++ C +kkkve    d +  v ++Yeg H+h
  Zmw_sc00583.1.g00350.1.am.mk 209 EDGYEWKKYGQKFIKNIQKMRSYFRCRHKLCGAKKKVEWLPGDaGGDVRVVYEGAHQH 266
                                   7**************************************998834679*********9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081117.66203269IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.9E-22204269IPR003657WRKY domain
SuperFamilySSF1182906.93E-20205269IPR003657WRKY domain
SMARTSM007742.7E-23208268IPR003657WRKY domain
PfamPF031061.0E-19209266IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MNKRRRLLLV FAGTKRDCCR GSGSSCSSHA EYTTTRFRSG FSIRKKQGIG RARSRATTAT  60
DRVLDSYESG PGENLRNSRS LSWATILLLV YRCIYPAKAY GDWVSVYFYY LESADTCEPA  120
DFHIHVATKH GRLSELHGCS QNRWPPTLPT PDWWGPRKLR APLSATTGKP KIRALLLLLE  180
STGEAGEERN EGAAAAAETG IGNQLEMPED GYEWKKYGQK FIKNIQKMRS YFRCRHKLCG  240
AKKKVEWLPG DAGGDVRVVY EGAHQHGSPT SAPGSGQGGS SGGGAAANQY ELRAQYFGGS  300
RSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
126KRRRL
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP101583444